Portunus trituberculatus (swimming crab): 123512535
Help
Entry
123512535 CDS
T07853
Name
(RefSeq) uncharacterized protein LOC123512535
KO
K06100
symplekin
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123512535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123512535
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123512535
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123512535
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123512535
U7-dependent histone pre-mRNA processing factors
123512535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
123512535
NCBI-ProteinID:
XP_045124896
LinkDB
All DBs
Position
34:complement(10703249..10729860)
Genome browser
AA seq
728 aa
AA seq
DB search
MEYAAMLSSPDLVSGLRDLLTDSDVAVVKRTVRVFANVYRHALRLLAAGELDEATFLAAW
PAMSGVADHILSMLATAENEGVTVHVVRFLEAALVAHLMSDVSRFPEVAVYGPKMIAKGV
AALTDLVSTPYIGGSAFLVAMRALITVACYKPDLWTPVTNLIERQIASPPPTLFDHNVRS
LHKTLQRNLFRLLRRADSAALRSQLIEMMVTVGVPRRMLSQWAPPPENRKRPAQSQSEEA
ITGRTTPPVKRARQEDDDDAGKAAPRDPRDTRANRDPRDPRLNGHLREPRDPRDPRDPRA
AMRGDPRSSSLQDARVAGLGQDPQPYNSRSRSNSPPDSGNIPSGAQAPAAAAAAAPASRP
DKKEMSNFEFLKSLISTKKKASLSFLERCSDKERALYERLDHPSVVRLVLSCLDSVPDSP
PEDLLAKLGRTSGDVTGIREQLTSLLAPHIHADFISGLADDEGSAPPSRPSSNSSAFSAR
GTPSHSEASPPSPPSSARSTPSDPAQVCHSDVDLRHLLNRGFRTTGDVDMRDTRHLLPRE
PPATNPAEASRADPRPAIATSTRLDPRIAMLDPRRIDHARCEAPRGGLDPRITQAYTNSH
DPMAGRDGPFMEGSRPPYMAGHPPPPHGYMPGGPQGYMEGGRPPFLEGGNGGMVGVRHGF
DMPGYEGQYPAPHMGGPQDFMGPRGMMGGGPRGMGGPWQGAGAPHNRMGVMMPLMNGGSG
MFSPPMHL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggagtacgccgccatgctgagctcgccggacctggtgtctggcctgcgcgacctgctg
acggacagcgacgtggcggtggtgaagcgcaccgtgcgggtgttcgctaatgtgtaccgc
catgcgctgcggctgctggcggcgggcgagctggacgaggccaccttcctggccgcctgg
cccgccatgtccggcgtggcagaccacatcctgagcatgctggccaccgcagagaacgaa
ggcgtcaccgtgcacgtggtgcgcttcctggaggcggcgctggtggcgcacctcatgagt
gatgtgagccgcttccccgaggtggcagtgtatggccccaagatgatcgccaagggcgtg
gcggcgctcacggacctcgtctccactccctacatcggcgggtctgccttcctagtggcg
atgcgcgccctcatcaccgtggcgtgctacaagcctgacttgtggacgcccgtcaccaac
ctcatcgagcgccagatcgcctcgccgccgcccacgctcttcgaccacaacgtgcgctct
ctccacaagaccttgcagaggaacctgttccgcctgctgcgccgcgctgactccgccgcc
ctgcgcagccagctcatcgagatgatggtgacggtgggcgtgccccgccgcatgctgtcc
cagtgggcaccgcctcccgagaaccgcaagcgtcccgcccagtcccagagtgaagaggcc
atcacggggcgcaccacgccgcccgtcaagagggcccgccaggaagatgacgacgatgcg
ggaaaagccgcgccccgcgaccccagggacacacgtgccaaccgtgacccccgtgacccg
cgcctcaacggccacctcagggagccccgtgacccacgtgatcctcgcgacccgcgcgct
gccatgcggggagacccacgcagcagttccctgcaagacgcccgcgtggcaggcctggga
caagacccacagccctacaactctaggtcgaggtccaactcgccccccgactcgggcaac
atcccgtctggggcgcaggcccccgccgctgccgccgccgccgcccccgcctcgcggccc
gacaagaaggagatgtccaactttgagttcctgaagagcctgatcagcaccaagaagaag
gcgtcgttgtcgttcctggagcggtgctcggacaaggaacgcgcgctgtacgagcgtctg
gaccaccccagcgtggtgcgcctcgtgctgtcctgcctggacagtgtgccggactcgccg
cccgaggacctgctggccaagctgggccgcacctcgggggacgtgacgggcatcagggag
cagctcacctccctgctggcgccgcacatccacgctgacttcatcagcggcctggctgac
gacgagggcagcgcgccgccctcgcgcccctcctccaattcatcagccttctccgcccgc
ggcacgcccagccacagcgaggcctcgccgccctccccgccctcttccgcgcgttccacg
ccctcagaccccgcccaggtgtgccactcagacgtggacctgcggcacctgctgaaccgc
ggcttccgcaccaccggcgacgtggacatgcgcgacaccagacacctgctgccccgcgaa
ccgcccgccaccaaccctgctgaagcgtcgcgcgctgacccgcgccctgccatcgccacc
agcaccaggctggaccccaggatcgccatgctggaccctcgccgcattgaccacgcgcga
tgcgaggcgccccggggaggcctggacccccgcataacccaggcctacaccaactcacac
gaccccatggcggggcgtgatggccccttcatggagggatcgcgacccccgtacatggca
ggtcacccgccgcccccgcatggctacatgcccggcgggccgcaaggctacatggaaggt
gggcggccgcccttcctggagggcgggaacggcggcatggtgggcgtgcggcacggcttc
gatatgccgggctacgaggggcagtaccccgccccgcacatgggcggcccgcaagacttc
atggggccccggggaatgatggggggcggcccgcggggtatgggcggcccctggcagggg
gccggcgctcctcacaacaggatgggcgtcatgatgccactcatgaacggcgggtcgggc
atgttctccccgcccatgcacctgtga
DBGET
integrated database retrieval system
