Portunus trituberculatus (swimming crab): 123512858
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Entry
123512858 CDS
T07853
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123512858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptru03036
]
123512858
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
123512858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
123512858
NCBI-ProteinID:
XP_045125447
LinkDB
All DBs
Position
34:8664475..8703902
Genome browser
AA seq
1553 aa
AA seq
DB search
MINSGQNRGGGGRCTMAAGGEDIQGRKFPFFEGGDGGVWRSEAGPAWRGTCYPVTPLTPQ
QSPQFPAQDPRNPVMEKIVYAGVSLEIPSEVCENINILFEMISPDTWNNHLTDEHRERLM
GFLPTFPQNDLQEKTRTLEMFFMDENFRHGTPLRLFHEQLCKGFFNPEIAKMRAIHKKIL
FKEYRYRQKQYLHHTLEEILVRRKRVLDIVSSMPPDDVPKIPRLPPLHNKKKSSRTSIEY
CTKKRYFRELAAIKAEVGDTSDLSEDEIYPEGPGASLNKKQRRQLGGLESSLPPDLLPVR
ATHSSGSLALDLELRITPTNNPLDLTDDHFRAMLAAHRLRRTKRESSVDLDTRGITLQDI
ITRAQVQMKRPPQRTTASPLPPERPKKKIKMKKESPSSLSSSSSSMMLPSSTASHHSLHH
IELPGATVVKTEPQSDTESSSSSSSSSSVSDSEETEVKKEVPPVVLSPVKGRVVAKETRV
KLEPQDLPLEEVEVGSLVGMEQLPIKEEKFKEEVKEEMMEDQVTAAAIETSSELTAALES
IGACIAPELTQETHICFFSLARDIICSTGEQRMTRAQLESSIRVWQESAIAPLNEWYSLV
PSWVDILPSAINFLCGHFTDVQPADFVPYIEYKSQLKVYQWIGAGRDSDGHLEPLAQFWL
ANKSSMSSEWIEDDLVGTKLEVEESDIIPPPRCYTKWTVQAATDTEKELYRAQEKLRYEK
PHKAYTYRMHGYESVVGPVKGIYTQQTGLNKARGHSLLVPDRPAYVTILSLVRDAVARLP
NGEGTRSDICELLKESQYLAPLTTPTAENNLNSVVSGALDRLHYEHDPCVKYDTPRKQWI
YLHRNRSEEEFERMHHLNGPGGNKLKKPAPRRQSRTKTKEPVTLKAAPNVALEPLTPVAK
AEMKLKQEEMAVLAKPKAESPVKLEHLGAAGIGKALTSVRVGGVRGAVGASSVQTIQVST
TGGVQTIKVALPPGAQTLTKVNPQTLAKVGTQAVSRAATQSLAKSAAAAGLKGVNLQQTV
LQAGVAGQNLGPESVLTTQHLTTLPAGTVGAAKTRAPVVTLTTREAARLPAPSIAQARSA
PPAAASSPASQQPQQSPQHVSHNPTLSSQVTSSGMAMGKLSSTATVVNMSSAAAQKSNLF
SLGGIKLLQAAPQQLGGKAGSTSPAMVNSITKLQTLMVDGKVLMQGGKVGWASTGRNVTM
AGGVGGKQVITGVFPGQQIATVESLLSQSEKTTQIQAGGVITTMAGNKLASGNVIQLAGG
AGGVQRLTLVSPQGSHVPLTTTSQRLVLATGSQGGKLDGSSSKAQVVQTIQTLQPASHVV
QSGPGGVTTTTATTSTTAAVTTSTTSTTNTSTHVITSPVASTTTTSQARFFSVGQQPKTI
VQGLNVAGKPSVLSGGIRLVQPAVSGGGGSTTTGNLITIGGKQVLLTSKPFAQQGQVQQV
MLTSGNLKGGLQASQGSSAGAGPGAVVVASGAGGQQIVLPASALQGSQLNLKGLQAFHTL
KVIPASQVTQQQRGKPVLARIVSPASVRSAVPTTTTTSLPPSTAPSGHDPNKS
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgataaatagcggtcaaaacagaggtggtggcggacgctgcacaatggccgccggggga
gaagacatccaggggcggaaatttccatttttcgaaggcggtgacggcggggtgtggcgg
agcgaggccggaccagcgtggcgagggacctgctaccccgtaacgcccctaacaccgcag
caaagccctcaattccccgcgcaggacccgaggaacccagtgatggagaagatagtgtac
gcaggtgtgtccctggagatcccatcagaggtgtgtgagaatatcaacatcctctttgaa
atgatatcgccggatacgtggaacaaccatctcactgacgaacaccgcgagaggctcatg
gggtttcttcccacgttcccccaaaatgacctgcaggagaagacacgcactctggaaatg
ttttttatggatgagaatttccgccacggcactccactccgcctcttccacgagcagctg
tgtaaaggattcttcaacccagagattgccaagatgagagccatccacaagaagattctg
ttcaaggagtacaggtacagacagaagcagtacctacaccacaccctggaggagatcctg
gtgaggcggaagagggtgctggacatagtgagcagcatgccacctgatgacgtgcccaag
atacccagactgcctccactgcacaacaagaagaagagctccagaacctccattgagtac
tgcaccaagaagcgatacttccgggagctggcggccatcaaggcggaggtcggcgacacc
agcgacctttccgaggatgagatctacccagaggggcccggtgcgtcgctgaacaagaag
cagcggcggcagcttgggggcctagagtcgtcgctgccgccagacctgctgccggtgcgc
gccactcacagcagcggctccctagcactggacctggagctgcgcatcacacccaccaac
aacccactggacctcaccgatgaccacttcagagccatgctggcagcacacaggctcagg
cgcaccaagagagagagctcggtggacctggacacacgcggcatcaccctgcaggacatc
atcacccgggcacaggtacaaatgaagcggccaccacagaggaccaccgcctcaccactg
cctcctgagcgacccaagaagaagataaagatgaagaaggaatccccatcgtcactgtcc
tcctcctcctcctccatgatgctcccgtcctccaccgcatcacaccactccctccaccac
attgagctccctggcgccactgtggtcaagacggaaccacagagcgacactgaatcttcg
tcgtcctcgtcctcgtcctcgtcggtcagtgattcggaggagacggaggtgaagaaggaa
gtgccgcccgtcgtcctcagtcctgtcaagggaagagtggtggcaaaggaaacaagggtg
aagttggagccacaagacctgccgctggaggaggtggaggtgggcagcttggtggggatg
gaacagctgcctataaaggaggagaagttcaaggaggaagtgaaggaggagatgatggag
gaccaggtgactgctgctgccatagaaacctcctcagaactcacggcggcattggagagc
atcggtgcctgcattgcgccggagctgacccaggagacacacatctgcttcttcagcctg
gccagggacatcatctgctcgacaggggagcagcggatgactcgggcacagctggagtca
agcatccgtgtgtggcaggagtcagccatcgcgcctctcaacgagtggtactccctcgtg
ccctcctgggtagacatcctcccctccgccatcaacttcctctgtggccacttcacggat
gtacagccagcagactttgtgccatatatagagtacaagagtcagctgaaggtgtaccag
tggatcggtgccggccgggacagtgacggacacctggagccactagcacagttctggctg
gctaacaagtcctcgatgagcagtgagtggattgaggatgacttggtgggcactaagctg
gaggtggaggaaagtgatattatcccccctcctcgctgctacaccaaatggacagtacag
gcagccacggacactgaaaaggaactgtatcgtgctcaagagaaactacgctatgaaaag
ccacacaaagcctacacatacagaatgcacggctatgagagtgtagtggggccagtgaaa
gggatctacacccagcagacaggactcaacaaggctcgtggtcactccctgctggtgccc
gacagacccgcatatgtcaccatcctctccctcgtgagggatgctgtggcgcggctgccg
aacggggagggcacacgttcggacatctgtgaactactgaaggagtcacagtatttggcc
ccgctgaccacccccactgcggagaacaacctgaacagtgtggtgtcgggtgccctggat
cgcctgcactatgaacacgacccctgtgtcaagtatgatacccccaggaagcagtggatc
taccttcaccgcaaccgtagtgaagaggagtttgagcgcatgcaccacctcaacggtccg
ggcggcaacaagctgaagaagccggcgccgcgcagacagagccgcaccaagaccaaggag
cccgtcacactcaaggccgcacccaacgtggctctcgaaccccttacccctgtggccaag
gcggagatgaagctgaagcaggaggagatggcagtgctggctaaacctaaggcagagagt
ccggtgaagctggagcacctcggggcagcaggcattggcaaggcactgacttctgtaaga
gttggtggagtgcgtggtgcggtgggtgccagcagtgtgcagacaatccaggtatccacc
acaggaggcgtccagactatcaaggtggccctcccccctggagcacagacacttaccaag
gtcaacccacagacactagccaaggttggcacgcaggcggtgagtcgagcggccacccag
agcctggccaagagtgcggcggcggcgggcctgaagggagtgaacctgcagcagactgtc
cttcaggcgggggtggcagggcagaacctgggcccagaatctgtcctcaccacccagcac
ctcaccaccctgcctgctgggacagtcggtgcagccaaaacccgtgccccagttgtcacc
ctcactacaagagaggctgccagattaccagccccctccattgctcaagcccggtcagcc
cccccagctgcagcctcctctccagccagccagcagcctcagcagtccccgcagcatgtg
tctcataaccctacactctcctcacaggtgacgagcagtggcatggcaatgggcaagctc
tccagcacagccacagtcgtcaacatgagctctgctgctgctcagaagtccaacctcttc
tcccttggtggcatcaagcttctacaggcagcacctcagcagctgggaggcaaggcaggg
tcaacctctcctgccatggttaactcaatcaccaagctgcagaccctgatggtggacggc
aaggtgctgatgcagggaggcaaggtaggttgggcaagcactggccgcaatgtcaccatg
gcgggcggtgtgggcggcaagcaggtgatcactggtgtgttccccggccagcagattgcc
acagtggagagtctcctcagccagtcagagaagaccacacagatacaagctggtggagtg
atcaccaccatggcgggcaacaagctggcgagtggcaacgtgatccagctggccggtggg
gcgggcggcgtgcagcggctcactctggtctccccgcaaggctcccacgtccccctcacc
accaccagccagagactcgtcctggccactggctcccagggtggcaagctggatgggtct
agcagcaaggcacaagtggtacagaccattcagaccctccagccagccagtcacgtggtg
cagagtggaccagggggcgtcaccaccaccaccgccaccacctcaaccactgctgctgtc
actacctccaccacctccaccaccaacaccagcacccatgtcatcaccagccctgtagcc
tccaccaccaccacgtcccaggccaggttcttctcagtgggccagcaaccaaagactatc
gttcagggcctgaatgttgccggcaagccgtccgtgctgtcgggcggcatccgtcttgtg
cagccagcggtgagtggaggtggaggctccaccaccacggggaatctcatcaccattggt
ggcaagcaggtcctgctcacctccaagccgtttgcccaacagggacaggtgcagcaggtg
atgctgaccagtgggaacctgaagggtggtctacaggcctcccaggggtcatcagcgggg
gctggaccgggggcggtggtggtggccagtggggcaggtggccagcagatagtgctgcct
gcctcagcactgcaaggctcacaactcaatctgaagggtctgcaggcattccataccctg
aaggtgatccctgcctcgcaggtcacacagcagcagagaggcaagccagtgctggcgagg
atagtgtctccagcctcggtccgcagcgctgttcccaccaccaccaccacctcactgcca
cccagcacagccccctcaggacatgaccctaataagtcataa
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integrated database retrieval system
