Portunus trituberculatus (swimming crab): 123512976
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Entry
123512976 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03440
Homologous recombination
ptru03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123512976
03450 Non-homologous end-joining
123512976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptru03032
]
123512976
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123512976
DNA replication proteins [BR:
ptru03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123512976
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123512976
BRCA1-C complex
123512976
NHEJ (non-homologous end-joining)
MRX complex
123512976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
SMC_N
AAA_21
SbcC_Walker_B
Cortex-I_coil
AAA_13
AAA_29
Prefoldin_2
TMF_TATA_bd
AAA_5
ABC_tran
Motif
Other DBs
NCBI-GeneID:
123512976
NCBI-ProteinID:
XP_045125666
LinkDB
All DBs
Position
35:9831456..9857927
Genome browser
AA seq
1317 aa
AA seq
DB search
MSHVSRLAILGVRSFGTDEHKVVEFNRPLTLILGQNGCGKTTIIESLKYVTTGDPPPGSG
SGSSFIHDPKITGEAKIKGQVRLQFCSVQGEMMTAVRSMEATQRAKKVEIKTISNTIALR
DKSGHVTTIDGKCNDILTSMSTYFGVSKAILNNVIFCHQEESNWPLDEGKKVKEKFDAIF
SATQYIKALDAIKKHRKDMMSNVKNMNVHLGLLRQLKEEVKRKQTDLENSEKQQASLKEE
VQQIADELVPLYKRLKEIAKMEDDLLAIKEELAGKNHQLKSLRQIQEELRASLTEQLNCS
DRELYNMIADFKENLEKAEAQQQKLVSEGREIDQEMQERQHESARAQRRQGELEAAHSAH
KMELALRNTTMADLVQEFSLSEFRNVSEFCEQKAEAVLSQLLQHVELQRANILTKKKEFE
ENEAKLQMEIDNLRSEEAALQYKIKSKGTELNELNQKIREKKQKLMRTESELSYTNLDTI
KEELAQVEEKIQTEEALVSTKVMVEEIDEEKRKRRELQGDLDEAKRLVSKMTRQAEDRSQ
LDIHTKDRKDLENKIEFLKRKHADEFEHLLGEMPQDNIKNKMDTCMHSLRKSVAENQESL
SSLNKRKAQLDTTIKSLKVQAERKEKEINELENKVNSICGGTDLDRSLVKAKKTKEDLTR
ERADLTSSIGVLKKFQDRLRQKDCCPLCHRDFSTKDEVSSLIEELEEKVSRIPEKLRGVK
EKLEDQEKLHDQMIQLQPQRDRTIQVRSELEKIRAQIEEDMKELQSVNQEIENKTELLEM
TQSDEETARSIQGDVITIENHLRRVKQLGVQIEDLQATLGGADGGLSLEEAMAQQGELEE
RYRKTQLRLEELQEKLREHQDRLQGYKNRKLELSRQELELKNKMQEMVKLKEEKAKEEKV
RLEENHKQLEEEIEQAKVEIAPYKYKINEKTKEKGQITQNKENYVDVENKKVNAVLEKHR
SAFSTHSSIKEYIAGGGEKNLRDIQQKISSLLKKISSLESQKQLLNEDNRKLEKEITNQR
ERKRNLDSEKKIRDKEREAETVQHEISSLEERVGGFSVETLIEEKMQLNSRGSSLQTKKS
NLEGHLQELEKNISLLKVDLDRKQMKDAPSNFKKKMLELKCTEMAIEDANTYHKVLDTAI
MRFHREKMKTLNTIVRELWRQTYKGNDVDYIEIRTKDTEAKGADKRQTYDYRVVMVKNDI
EMDMRGRCSAGQKVLASLLIRMALAETFSCHCGILALDEPTTNLDKENIDALGAALSEIV
NAHRNRASSQLIVISHDSNFLEKLACSSLVDEYVEVTRNANGLSQINMRKFKETTRV
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatgtgagtcgactggcaatccttggtgtgaggagttttgggacagatgagcac
aaggtggtcgagttcaaccggccactcacgctcatcctgggccagaatgggtgtggcaaa
acgaccatcattgagtcgctgaagtatgtcactacgggggatccgccgcctgggagcggc
agcggctcctctttcattcacgacccaaagattaccggggaggcaaagattaaaggtcag
gtgaggcttcagttctgcagcgtgcaaggggagatgatgacagcggtgaggtccatggag
gccacacagagggccaagaaggtggagatcaagaccatctccaacactattgcactgagg
gacaagagcggccatgttacgaccattgacgggaagtgtaatgacattttgacgagcatg
tcaacatactttggagtttccaaggcaatcctgaacaatgtgatcttttgccatcaagaa
gagtcaaactggcccctggatgaaggaaagaaggtgaaagagaagtttgacgccattttc
agcgccacacagtacatcaaagcactggatgccataaagaagcaccgcaaggatatgatg
tcaaacgttaaaaacatgaatgttcacttgggacttctgcggcaactgaaagaagaggtg
aagaggaagcagacagatctggagaactcagagaagcagcaagccagccttaaggaggag
gtgcagcagattgcggatgagttagtgccactgtacaagagactgaaggagattgccaag
atggaggatgacttacttgccatcaaggaagaattagctgggaagaatcaccagctaaag
tcactgagacagatacaagaggaactgagagcatcattgactgagcagttgaattgttca
gaccgggagctttataacatgatagctgacttcaaggaaaacttggagaaagctgaggct
caacagcagaagctggtgtctgaaggaagggagatagaccaggagatgcaggagaggcag
catgagtcagcacgtgcccagaggagacagggggagctggaggcagcacactcagcacac
aagatggagctggcactaaggaacaccaccatggcagacctggtgcaagagttttcttta
tctgagttcaggaatgtgagtgagttctgtgagcagaaagcagaagcagtactgtcccag
ctccttcaacatgtggagctgcaacgtgccaacatccttaccaagaagaaagagtttgag
gagaatgaagcaaagttacaaatggagattgacaacttaaggtctgaggaagctgcttta
cagtacaagatcaagagcaaaggcactgagctcaatgagctgaaccaaaagatcagagaa
aagaagcagaaactaatgcggacagagagtgagctttcctacaccaacctagacacaatc
aaggaggagctggcccaggtggaggagaagatccagacagaggaggcactagtcagcact
aaagtgatggttgaggaaattgatgaggagaagaggaagaggcgtgagttgcagggggac
ttggacgaggccaagcgcttggtttccaagatgacacggcaggcagaggaccgctcccag
ctggacatccacaccaaagataggaaggacctggagaataagattgagtttttgaaacgt
aaacatgctgatgagtttgagcacctgcttggtgaaatgccccaggacaacatcaagaac
aaaatggacacctgtatgcacagcctgcgaaagtctgtagcagagaaccaggagagcctg
tcatccctgaataagaggaaggctcagctagacacaacaatcaagagccttaaagttcaa
gcagaaaggaaagagaaagagattaatgaattagagaacaaagtgaacagtatctgtggg
ggaacagatttggacagatctctggtcaaagctaagaagacaaaggaagacttgactcgt
gagagagcagacctgacaagctccattggtgtgctcaaaaaatttcaggacaggttgaga
cagaaagattgttgtcctttgtgtcacagagatttttccaccaaagatgaagtttcatct
cttattgaagagctggaggagaaagtgagcagaattccagagaagctgagaggcgtgaag
gagaagcttgaggatcaggagaaactgcatgaccagatgatccaattgcagcctcagagg
gaccggaccatccaagtgcgttccgagttggagaagatcagggcacagatagaggaagac
atgaaggagctacagtctgtgaaccaggaaattgagaacaagactgagctattggagatg
acacagagtgacgaggaaacagcccgcagcatccaaggggacgtcatcaccatagagaat
cacctgcggcgtgtgaagcagcttggggtgcagatagaggatctgcaggccacactggga
ggtgcagatggaggcctgagtttggaggaggctatggctcagcagggtgagctggaggaa
cgctaccgcaagactcagctcaggttggaggagctgcaagagaagctgagagagcaccag
gaccgtctgcagggatacaagaaccgtaaacttgagctctctagacaggaacttgagctg
aagaacaaaatgcaggagatggtcaagctgaaggaggaaaaggctaaggaggaaaaggtt
cgcttggaggagaatcacaaacagttggaagaggaaatagaacaagctaaagttgagatc
gctccctataagtacaagatcaatgagaaaaccaaagaaaagggccagatcacccagaac
aaagagaactatgtcgatgttgaaaacaaaaaggtgaatgctgtcctggagaaacaccga
tctgccttcagcactcactccagtatcaaggaatacattgctggtggtggtgagaaaaac
ctgcgtgacatccagcagaaaatttcatccttgcttaaaaagataagttccctggaatca
caaaagcagttgctcaatgaggataatcggaaactagagaaggagatcaccaaccagagg
gaaaggaagaggaatcttgacagtgagaaaaagatccgagacaaggagagagaagctgag
acagtccagcatgaaatttcatcactggaggagcgtgttggaggattcagcgtggaaact
ctcattgaggaaaagatgcagctcaacagtagaggatcttcccttcagacaaagaaatca
aatctggaagggcatcttcaagaactggaaaaaaacatttcactcttgaaggtggacctt
gatcgcaagcagatgaaagatgcccctagtaacttcaagaaaaaaatgttggaattgaag
tgcacggagatggctattgaggacgccaacacctaccacaaggtgctggatacggccatc
atgcgtttccatcgggagaagatgaagaccctcaacaccattgtgcgggaactgtggcgc
cagacctacaagggcaatgatgttgactacatagagattagaactaaagacactgaggcc
aaaggagctgacaagcgccaaacttacgactacagagttgtcatggttaaaaacgatatt
gagatggacatgcgagggaggtgctctgctggtcagaaagtgttggcctcactgctcatc
aggatggctcttgccgagaccttcagctgccattgtggtatcctggctttggatgaacct
acaaccaacctggacaaagaaaacattgatgctcttggtgcagctttgtctgagattgtc
aatgctcacagaaacagggccagcagtcagctcattgtcattagccatgactcaaatttc
ctggagaagttggcttgctcatctcttgttgatgaatatgttgaggtgaccaggaatgca
aatggtttatcacaaatcaacatgcgcaagttcaaggaaactacaagagtgtga
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integrated database retrieval system
