Portunus trituberculatus (swimming crab): 123512997
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Entry
123512997 CDS
T07853
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1 isoform X1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123512997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123512997
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123512997
mRNA degradation factors
5'-3' decay
Lsm complex
123512997
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
123512997
NCBI-ProteinID:
XP_045125718
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Position
35:8098168..8118555
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AA seq
140 aa
AA seq
DB search
MSNIPGAAQLFDELDSGCVAPEKLMVYLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGN
RYGDIERGVFVIRGENVVLLGEIDETKEDNDKLENVSIEEILEAQRVEQERRQEQEQLRA
RFMKERGLQYTAEIGPDDMY
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatattccaggcgcagcgcagctctttgatgaacttgacagtggctgtgttgct
ccagagaagttgatggtgtacctgcgggatggaaggactctcattgggtacctgcgcagc
gttgaccagtttgccaacctggtcctgcaccgcaccattgaaaggatccacgttgggaat
cgctatggtgacatagagcgaggcgtctttgtcatccggggggagaatgtggtgctgctc
ggagaaattgacgagacaaaggaagacaacgacaaattagaaaacgtgagcatagaggaa
atcttggaggcacagcgagtggagcaggagcgacggcaggagcaggagcagttgagggcg
cggttcatgaaggaacgagggttgcagtacacagccgagattggaccagacgatatgtac
tag
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integrated database retrieval system
