KEGG   Portunus trituberculatus (swimming crab): 123513110
Entry
123513110         CDS       T07853                                 
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-C-like
  KO
K08770  ubiquitin B/C
Organism
ptru  Portunus trituberculatus (swimming crab)
Pathway
ptru04120  Ubiquitin mediated proteolysis
ptru04137  Mitophagy - animal
ptru04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123513110
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    123513110
   04137 Mitophagy - animal
    123513110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptru04121]
    123513110
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptru04147]
    123513110
Ubiquitin system [BR:ptru04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   123513110
Exosome [BR:ptru04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   123513110
  Exosomal proteins of other body fluids (saliva and urine)
   123513110
  Exosomal proteins of colorectal cancer cells
   123513110
  Exosomal proteins of bladder cancer cells
   123513110
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2
Other DBs
NCBI-GeneID: 123513110
NCBI-ProteinID: XP_045125922
LinkDB
Position
35:8628825..8634010
AA seq 990 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQXEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGSW
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaacattgacggggaagaccatcacactagaggttgagccctca
gacacgattgagaatgtgaaggccaagattcaggacaaggagggcattcctcctgaccaa
cagaggctgatctttgctggcaagcagctggaagatggcaggaccctgtctgactacaac
atccagaaggaatccacacttcatcttgtgttgaggttgagaggaggaatgcaaatcttc
gtcaagacactcacaggcaagaccatcacactagaggttgagccctcagacacgattgag
aatgtgaaggccaagattcaggacaaggagggcattccacctgaccagcagaggctgatc
tttgctggcaagcagnctgaggatggcaggaccttgtctgactacaacatccagaaggaa
tccacacttcatcttgtgttgaggttgagaggaggaatgcaaatcttcgtcaagacactc
acaggcaagaccatcacactggaggttgagccctcagacaccattgagaatgtgaaggcc
aagattcaggacaaggagggcattcctcctgaccagcagaggctgatctttgctggcaag
cagcttgaggatggcaggactttgtctgactacaacatccagaaggaatccacacttcac
cttgtactgaggttgagaggaggtatgcagatcttcgtcaagactctcacaggcaagacc
atcaccttggaagtggagccatcagacactattgagaatgtgaaggcaaaaatccaagat
aaggaaggcattccacctgaccagcagaggctgatctttgctggcaagcagctggaagat
ggcaggaccttgtctgactacaacatccagaaggaatccacacttcaccttgtgctgagg
ttgagaggaggtatgcagatcttcgtcaagacactcacaggcaagaccatcacactagag
gttgagccgtcagacactattgagaatgtgaaggccaagattcaggacaaggagggcatt
ccacctgaccagcagaggctgatctttgctggcaagcagcttgaggatggcagaaccttg
tctgactacaatattcagaaggaatccactcttcaccttgtgctgaggttgagaggaggt
atgcagatcttcgtcaagacactcacaggcaagaccatcacactagaggttgagccgtca
gacaccattgagaatgtaaaggccaagattcaggacaaggagggcattcctcctgaccag
cagaggttgatctttgctggcaagcagctggaagatggcagaacactctctgactacaat
attcaaaaggaatccactcttcaccttgtacttaggttgagaggaggtatgcagatcttc
gtcaagacactcacaggcaagaccatcacactagaggttgagccgtcagacaccattgag
aatgtaaaggccaagattcaggacaaggagggcattcctcctgaccagcagaggttgatc
tttgctggcaagcagctggaagatggcagaacactctctgactacaatattcaaaaggaa
tccactcttcaccttgtacttaggttgagaggaggtatgcagatctttgtgaaaaccttg
acaggcaagaccatcactttggaagtggaaccgtcagacaccattgagaatgtgaaggcc
aagattcaggacaaggagggcattccacctgaccagcagaggctgatctttgctggcaag
cagcttgaggatggcaggaccttgtctgactacaacatccagaaggaatccacacttcac
cttgtactcagactgagaggaggtatgcaaatcttcgtcaagacactcacaggcaagacc
atcaccttggaagtggagccgtcagacaccattgagaatgtaaaggcaaagatccaagat
aaggagggcattccccctgaccagcagaggctgatctttgctggcaagcagctggaagat
ggcaggaccttgtcagactacaacatccagaaggaatccacacttcaccttgtgctgagg
ttgagaggaggtatgcagatctttgtgaaaaccttgacaggcaaaaccatcactttggaa
gtggaaccgtcagacaccattgaaaatgtgaaggccaagattcaggacaaggagggcatt
ccccctgaccagcagaggctgatctttgctggcaagcaactggaagatggcaggaccttg
tctgactacaacatccagaaggaatccacacttcaccttgtgctgaggttgagaggaggt
atgcagatcttcgtcaagacactcacaggcaagaccatcacactagaggttgagccgtca
gacactattgagaatgtgaaggccaagattcaggacaaggagggcattccacctgaccag
cagaggctgatctttgctggcaagcagcttgaggatggcaggaccttgtctgactacaat
attcagaaggaatccactcttcaccttgtactgaggttgagaggaggtatgcaaatcttc
gtcaagactctcacaggcaagaccatcacactagaggttgagccgtcagataccattgag
aatgtgaaggccaagattcaggacaaggagggcattccccctgaccagcagaggctgatc
tttgccggcaagcagctggaagatggcagaacactctctgactacaatattcaaaaggaa
tccactcttcaccttgtacttaggttgagaggaggtatgcagatcttcgtcaagactctc
acaggcaagaccatcaccttggaagtggagccgtcagacaccattgagaatgtaaaggcc
aagattcaggacaaggagggcatccctcctgaccagcagaggctgatctttgctggcaaa
cagctggaagatggcaggactttgtcggactacaacatccagaaggaatcgacacttcac
cttgtactcagactgagaggagggagttggtag

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