Portunus trituberculatus (swimming crab): 123513636
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Entry
123513636 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123513636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123513636
03009 Ribosome biogenesis [BR:
ptru03009
]
123513636
03036 Chromosome and associated proteins [BR:
ptru03036
]
123513636
Enzymes [BR:
ptru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
123513636
Messenger RNA biogenesis [BR:
ptru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
123513636
Ribosome biogenesis [BR:
ptru03009
]
Eukaryotic type
90S particles
RNase
123513636
Prokaryotic type
rRNA processing factors
123513636
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
123513636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
123513636
NCBI-ProteinID:
XP_045126838
LinkDB
All DBs
Position
36:10872824..10891022
Genome browser
AA seq
1713 aa
AA seq
DB search
MSGGGGVWPGSNGSGGAMATAGWFFPEAESTVPANQWSNVGCASCSTDQHAPPPALPPHQ
HTTCPYHHQQQQHHQHHHHHAPGPPYTTQSVPEVLPYPPNIPPPSHYHPPHYSQPYPTQY
SVPPRPCTEQGGPTPVTAMRPPGPPPPILSYPPPGPSPGSASCPPPAPPYTGTPGYSWGT
TPLPSQIPQVGSSAQGSQQPWPHQEWEESCPPAHHDHTPRHPPHPGLDSRGREHDLPPRP
DNRPSHSSRYDSDQRSLEPKYKEDRGYGGENRWVERGRKRSMSPSEYSSRRSDSGCYSPS
SRSSRKPHSSRCDKERSSIEPRYKRDRRYNTYAEDKWPERGSRSSSSSKRSRSPAEAAPR
RRDTRNYSPPSKTSHDLRERSQGSHSRAARRSRSPGRRPPHSRSPIRKRPPPAHSPEPQH
NRTPDQVAAAAAAAAATAARKAESIGRQGSPDADQIDALIEKEMLKAVEEEEEETKTPWV
RSAPADLYYQRDDKNPLVTRATKKLMALCDVFDEKLVKRGERVRQEKKHKAEKNKESPQP
LTMCKSGCSKAKVATEEGDGKNPSKEDTVTGDGKDKTEGSEDGAKESSSPASAVPCLAEC
EGVPGQTAAGVAKSGSHHSHHHKKKKKKKETKGTDKASGQSSSSSSSSSSSSSSSSSSSS
EGDDSSSSEEDDESEMDRISKELEKKRSHPDRLHPELWFNDPGEMNDGPLCRCSLKAQRS
GIRHGYYVGEDNLNKCDPWTNNADRLHHYLITISPPTNFLIKTPTVIMHDSHEFIFEGFS
LLSHHPLEEVPTCRVIRFNIEYTILYIQEKIPDNFCIQELNLLYQYLFLELLELVDLNLK
SMGDSDGCPRFHFMPRFVRKLADNGKEILSMNEVLSSLLKNSGPLVQPEDLAHLLSMSQY
QWQNYADQLKGMVVTCPGMKPSSIRVDQLDRDQVSEETINYPVIVHFGIRPPQLSYAGNP
EYQKAWREYVKFRHLLANMPKPSFEDKRRLEAKENRLQEMRMTSKMKRDVTVAVSSQGFF
RTGIMCDVVQHAMLLPVLVCHLRFHQSLEVLEECIGYKFQTRFLLQLALTHPSYRENFGT
NPDHARNSLTNCGIRQPEYGDRRIHYMNTRKRGINTLINIMSRFGRNLETESKITHNERL
EFLGDAVVEFLTSIHLFHLFPSLEEGGLATYRAAIVQNQHLAVLAEKLRLDQFMLYAHGS
DLCHDFELRHAMANCFEALMGAIFLDSGIEEADKVLSSTLFKGEAVLHSIWVHYPLHPIQ
EQEPHGDRKWIKSFPILTKLSKFEESIGVEFKHIRLLARAFTDRSIGFNNLTLGSNQRLE
FLGDTVLQLVSSEYLYRHFPEHHEGHLSLLRSSLVNNRTQAVVCDDLGMTSYAMYSHLKT
ELKTKDRADLLEAFLGALYIDRGLKYCRTFCHVCFFPRLHQFIMNQDWNDPKSKLQQCCL
TLRTMDGGEPDIPIYKVIECKGPTNTRVYTVAVYFRGRRLAKASGHSIQQAEMNAAREAL
MNSKELFPQLDHQRRVIEKSVKIQGIGKQDSQDREKERGRDRNSRGHWREEERRGNRERP
RDRDKLDSKDFDRSRDGEKRDMRXKYQNTTDSEKSTEAKIFESDRSYGERDGERDRERNY
TDGERGDSKRGRGEIEDDRRYRMDSDNSRTSGGETRRGHSRHMTKDGPDLEKHRERHKAH
GRTRRSESPHDSSQKSTHHPRDDYGRKQVRSDW
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggtgggggagtgtggccaggcagcaatggcagtggtggggcaatggccact
gccggctggttcttccctgaggcggagagtactgtgccagccaaccagtggagcaatgtg
gggtgtgcctcctgcagcaccgaccagcatgccccaccaccagccctccctccccaccag
cacaccacctgcccctaccaccaccaacaacaacaacaccaccaacaccaccaccaccat
gccccaggcccaccctacaccacccagagtgtgccagaggtgctcccataccctcccaac
atccccccacccagccactaccacccgccacactacagccagccctaccccacccagtac
agcgtgcccccccggccatgcacagagcagggaggccccacccctgtcactgccatgagg
ccaccaggaccgccccctcccattctatcctatcccccacctggcccctcccctgggtct
gcatcctgtccccctcctgcccctccatacaccggcaccccggggtacagctggggcacc
acaccgctgccctcacaaatcccccaggttggcagctcagcacagggatcacagcagcca
tggcctcaccaagagtgggaggaaagctgtccgcctgcccaccatgaccacacgccacgc
caccccccgcaccccggcctggacagcaggggaagagagcatgacctgcctccccggcca
gacaacaggccctcccactcctcaaggtacgatagtgatcagcgcagcttggagcccaag
tacaaggaggaccgtggttatgggggtgagaaccggtgggtggagagagggaggaagcgt
tccatgagcccctcggagtactccagccgcaggagtgacagtggctgctactccccgtca
tccaggtcttcaaggaaaccacactctagcagatgtgacaaggaaagaagcagcattgag
ccgcggtacaagagggaccgcaggtacaacacgtatgctgaggacaagtggccggagaga
ggcagcaggagcagcagcagcagcaagcggtctcggagccctgctgaggctgctcctcgg
aggcgagacacaaggaactactcgccgccctccaagacttcacacgacctgcgggaaagg
tcacagggtagccacagcagggcagcaaggaggtcaaggagcccaggtcgccggccccca
cattccaggtcacccatcagaaagagaccacctcctgcacacagcccagagccccaacac
aacaggactcctgaccaagtagcagcagcagcagcagcagcggcagcaactgctgctagg
aaggctgagtccattgggaggcaagggagtcctgatgctgaccagattgatgcactcata
gagaaggaaatgctgaaggctgtggaggaggaggaggaggagacaaagactccttgggtt
cgctctgcccccgctgacctctactaccagcgagatgacaaaaatcctcttgtaacacga
gccacaaagaagttgatggctctttgcgatgtgtttgacgagaagctggtgaagagagga
gagcgagtgaggcaagagaagaaacacaaggctgagaaaaacaaggagtcaccacagcca
ttgaccatgtgcaagagtggctgcagcaaagcaaaggtggccacagaggagggtgatggg
aagaacccatcaaaggaggacacagtcacaggggatggaaaggacaagactgaagggagt
gaagatggtgccaaggagagcagcagtccagccagtgccgtgccttgcttggccgagtgt
gagggtgtgccaggccagacagccgcaggagtggccaagtcagggagtcaccacagtcat
catcataagaagaagaagaaaaagaaagaaaccaagggcacagataaggcctctgggcaa
agcagcagcagtagcagcagtagcagcagcagtagcagtagtagtagcagtagcagcagt
gagggtgatgacagctccagcagtgaagaggatgatgagagtgagatggacaggatatcc
aaggaactggagaagaaacgcagccacccagaccgactccaccctgagctgtggttcaat
gatcccggtgagatgaacgacggaccactgtgtcgctgctccctgaaggcccagcgctcc
ggcatccgtcacggctactatgttggggaggacaaccttaacaagtgtgacccctggacc
aataacgctgaccggcttcaccactacctcatcaccatctcaccaccaactaacttcctg
atcaagacaccaacagtcattatgcacgacagccatgagttcatctttgaggggttctcg
ctgctatcccaccacccgctggaggaagtgcccacctgccgagtcattcgcttcaacatt
gagtataccattctctacatccaggagaagataccggacaacttctgcatccaggaactc
aaccttctgtaccagtatctctttctggaacttctagagcttgttgacctgaacctcaag
tcgatgggagacagtgacggctgcccacggttccacttcatgccgagatttgtgcggaaa
cttgcagacaatggtaaggagatcctgtccatgaatgaggtgctgagttcactgctgaag
aatagcgggcccctggtgcagcctgaggacctggcacacctactcagcatgtctcagtac
cagtggcagaactatgctgaccagctcaaaggtatggtggtgacctgtcccggcatgaag
cccagcagcatcagggtggaccagctggatcgggaccaagttagtgaggagaccatcaac
taccctgtcattgtacactttggcatacgtccccctcagctctcttacgccggcaatcct
gagtaccagaaggcgtggcgggagtatgtgaagttcagacacctgctagccaacatgccc
aagccttccttcgaggacaagcggcgtctggaggccaaggagaaccgactgcaggagatg
agaatgacctccaagatgaagagagacgtgactgtggctgtgtcttcccagggcttcttt
aggaccggcattatgtgtgatgtggtgcagcatgccatgttgctgccagtgctggtttgt
catctgcgcttccaccagtcccttgaggtgctggaggagtgcattggctacaagttccag
accaggttcctcctccagctggccctcacccacccttcctacagggaaaactttggcacc
aatccagaccacgccaggaactccctcaccaactgtggcatccgacagccggagtatggt
gaccggcgcatccactacatgaacacacggaagagaggcatcaacacgctcatcaacatc
atgtccagattcggccgcaacttggaaacggagagcaagataacgcacaacgaacggctg
gaattcttaggagatgctgtggtggagttcctcacctccatccacctgttccacctgttt
cccagcctggaggaaggaggactggcaacttacagggcagccattgtgcagaaccagcac
ctggccgtcctggcggagaagctgcggctggaccagttcatgctgtacgctcacggctcg
gatctctgccacgactttgagctgcgacacgccatggccaactgttttgaggcgttgatg
ggagcaatattcctggattctggcattgaggaggctgacaaggtgttgagctccaccttg
ttcaagggagaggctgtgctgcattccatctgggtccactacccgctgcaccccatccag
gagcaggagccgcatggggaccgcaagtggatcaagtccttccccatcctcacgaaactg
tccaagtttgaggagtccatcggcgtggagttcaagcacatccgtctgctggcacgtgcc
ttcactgaccgcagcattggcttcaacaacctcaccctcggctccaaccagcggctggag
ttcttgggagacacagtgctgcagctggtgtcctcagagtacctgtaccgccactttcct
gagcaccacgagggccatctttcgttgctgcgttcctccctggtgaacaaccgcacgcag
gccgtggtgtgcgacgacctgggcatgacctcctacgccatgtactcccacctcaagaca
gagctcaagaccaaggacagagctgacctgctggaggccttcctgggtgccctttacatt
gacaggggtctgaagtactgccgcacgttctgtcatgtgtgcttcttcccacgccttcac
cagttcatcatgaaccaggactggaatgaccccaagagcaagctgcagcagtgttgcctc
acactgcgtaccatggacggcggcgagccagacattcccatatacaaggtgattgagtgc
aagggacccaccaacactcgagtgtacacagttgcggtgtacttccgtggcaggcggctg
gccaaagcctcaggccactccattcagcaggctgagatgaacgctgcaagggaagcactc
atgaactccaaagaactgttccctcaacttgaccaccagcggagagtgattgaaaagagt
gtcaagatacaaggcattggcaagcaggattcccaggacagggagaaggagcgaggcagg
gacaggaacagcagagggcactggagggaggaagaaagacgaggaaacagagagagaccg
agagacagagacaaactagacagtaaagactttgacagaagcagagatggagaaaagagg
gacatgagangaaaataccaaaacactactgatagtgaaaaatcaacagaagcaaaaata
ttcgagagtgacagatcatatggagaaagagacggtgagagagacagagagagaaactac
acagatggagaaagaggagattctaagagagggaggggagaaatagaggatgacaggagg
tacaggatggatagcgacaacagtaggacatcgggaggtgagacaagacgtggccactca
agacacatgaccaaggacgggccagacttggagaagcaccgggagcgacacaaagcacac
ggccggaccagacgcagcgagagcccacatgattcaagccagaagagcacacaccatccc
agagacgattacgggcgcaagcaggttaggtctgactggtga
DBGET
integrated database retrieval system
