Portunus trituberculatus (swimming crab): 123513715
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Entry
123513715 CDS
T07853
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03013
Nucleocytoplasmic transport
ptru03015
mRNA surveillance pathway
ptru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123513715
09122 Translation
03013 Nucleocytoplasmic transport
123513715
03015 mRNA surveillance pathway
123513715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123513715
03041 Spliceosome [BR:
ptru03041
]
123513715
03009 Ribosome biogenesis [BR:
ptru03009
]
123513715
03012 Translation factors [BR:
ptru03012
]
123513715
Enzymes [BR:
ptru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123513715
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123513715
mRNA cycle factors
Stress granule specific factors
123513715
Spliceosome [BR:
ptru03041
]
Complex C
Other components
EJC/TREX
123513715
Ribosome biogenesis [BR:
ptru03009
]
Eukaryotic type
90S particles
Helicases
123513715
Translation factors [BR:
ptru03012
]
Eukaryotic type
Initiation factors
eIF-4
123513715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_30
AAA_22
TniB
Utp25_C
Motif
Other DBs
NCBI-GeneID:
123513715
NCBI-ProteinID:
XP_045127029
LinkDB
All DBs
Position
36:complement(11894126..11901080)
Genome browser
AA seq
402 aa
AA seq
DB search
MAEGRVRRFIPEDLSNVEFETSEEVQVVPTFDGMGLREDLLRGIYAYGFEKPSAIQQRAI
KPIVKGRDVIAQAQSGTGKTATFSISVLQILDISVRETQVLSLSPTRELAVQIQKVVLAL
GDYMSVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRTLRTRSIKMLVLDEA
DEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG
DMPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggacgcgtacggcggttcatcccggaggacctttccaatgttgagtttgag
acgagtgaggaggtgcaggtcgtgcctaccttcgatggcatgggcctgcgcgaggacctg
ctgcgggggatctacgcctacgggtttgaaaagccgtcggccatccagcagcgtgccatc
aagcccatcgtgaaggggcgggacgtcattgcacaggcgcagtcaggcacgggtaaaact
gcaaccttctccatctccgtcctgcaaattctggacatcagtgtgagggagacgcaggtt
ctcagtctctcacccaccagggagctggccgtccagatacagaaggtggtgttggcgctg
ggtgactacatgagcgtgcagtgccacgcctgcatcggtggcaccaaccttggcgaggac
atccgtaagctggactatgggcagcacgtggtctccggcactcctggcagggtgttcgac
atgatcaggcgacgcaccctccgtacacgttctattaagatgctggtgctggacgaggct
gacgagatgctgaacaagggcttcaaggagcagatctatgatgtgtaccgctacctgccg
ccagccacacaggtcgtcctcatctccgccactctgcctcacgaaattcttgagatgacc
tccaagtttatgacagaccccatccgtattttggtgaagcgtgatgaactgacgctggaa
ggtatcaagcagttctttgtggctgtggagcgagaggagtggaagtttgacaccctctgt
gacttgtacgacaccctcaccatcacccaggccgtcatcttctgcaacaccaagcgcaag
gtcgactggctgacagagaagatgcgagaggcgaacttcacagtctcctccatgcacggg
gacatgccacagaaggagcgagacgcaatcatgaaggagttcaggtcggggcagtctcgg
gtgctcatcaccactgacatctgggcccgagggattgacgtacagcaggtctcgctggtc
atcaactatgacctccccaataaccgtgagttgtacattcaccgcattggccgttcggga
aggtttggccgcaagggtgtggccatcaactttgtcaagaatgacgacatcaggatcctg
cgagacattgaacagtactactccacacagattgatgaaatgcccatgaacgtggctgat
ctgatttaa
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integrated database retrieval system
