Portunus trituberculatus (swimming crab): 123513835
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Entry
123513835 CDS
T07853
Name
(RefSeq) chromatin assembly factor 1 p55 subunit isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03082
ATP-dependent chromatin remodeling
ptru03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123513835
03083 Polycomb repressive complex
123513835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptru03036
]
123513835
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
123513835
Histone modification proteins
HAT complexes
HATB complex
123513835
HDAC complexes
Sin3A-HDAC complex
123513835
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
123513835
PRC2.2
123513835
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
123513835
Heterochromatin formation proteins
Other heterochromatin formation proteins
123513835
Chromatin remodeling factors
NuRD complex
123513835
NuRF complex
123513835
NuRF complex (fruit fly)
123513835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ANAPC4_WD40
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
123513835
NCBI-ProteinID:
XP_045127159
LinkDB
All DBs
Position
37:complement(414703..441747)
Genome browser
AA seq
456 aa
AA seq
DB search
MTDKEGSKVGDGGGPAPDLPPTLALAEVAPAPCLQDTFDDAVEERVINEEYKIWKKNTPF
LYDLVMTHALEWPSLTAQWLPDVTRPEGKDYSIHRLILGTHTSDEQNHLLIASVQLPNED
AQFDASHYDNEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVL
VFDYTKHPSKPDPSGECHPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINAT
PKENRVIDAKTIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRANNTNKPSHTVD
AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLSLKLHSFAMHKDEIFQVQWSPHNE
TILASSGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVI
CSVSEDNIMQVWQMAENIYNDEEPETPASELESGAS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaaagaaggctccaaagttggggatggtggtgggcctgcaccagacctcccg
ccgactctggccttggctgaagtggcacctgcaccatgccttcaagacacatttgacgat
gcagtggaggagcgtgtcatcaatgaggagtacaagatatggaagaagaacacacctttc
ctatatgacctggtaatgacacacgcactggaatggccatccctcaccgcacaatggctc
cctgatgtcacaaggcccgagggaaaggattacagcatccatcggctcatccttggaact
cacaccagtgatgaacagaaccaccttcttattgcttcagtccagttgcccaatgaagat
gctcagtttgatgcctctcactatgacaatgagaagggtgaatttggtggatttggctct
gttagtggcaagattgagattgaaatcaagatcaatcatgaaggtgaggtgaatcgagct
cggtacatgccccagaacccatgtgtcatcgccaccaagactccctccagtgatgtgtta
gtctttgattacaccaagcacccctccaagccagacccatcaggggagtgtcacccagac
ctgaggctgcggggtcatcagaaggagggatacggcctttcctggaacccaaacctaaat
ggatacttgttaagtgcatctgatgaccacactatatgcctttgggacatcaatgccaca
cccaaggagaacagagtcattgatgcgaagaccatctttacgggacacacagctgttgtt
gaggatgttgcctggcacttgctacatgaatctctgtttggctccgtggctgacgaccaa
aagttgatgatctgggacacacgtgccaataacaccaacaagccctcacacacagttgat
gcccacactgctgaggtcaactgtttatctttcaatccttattcagagttcatcctggcc
actggcagtgcagacaagacggtcgctctgtgggatttacgtaatctgagcttgaagctt
cactcgtttgccatgcacaaggacgagatcttccaggtccagtggtcacctcacaatgag
accatcttggccagctctggcacagaccgcagactacatgtgtgggacctcagcaagatt
ggagaagagcagagtgctgaagatgctgaagatggaccaccagagctattattcatacat
ggtggtcacactgccaagatatcagacttctcttggaatcccaatgagccatgggtcatc
tgctctgttagtgaagataacatcatgcaggtgtggcaaatggcagaaaacatttacaat
gatgaagagccagaaactccagcatctgaattggaatctggagcatcttaa
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