Portunus trituberculatus (swimming crab): 123513901
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Entry
123513901 CDS
T07853
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03013
Nucleocytoplasmic transport
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123513901
03015 mRNA surveillance pathway
123513901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123513901
03041 Spliceosome [BR:
ptru03041
]
123513901
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123513901
Spliceosome [BR:
ptru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
123513901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
123513901
NCBI-ProteinID:
XP_045127299
LinkDB
All DBs
Position
37:complement(29463512..29495617)
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AA seq
844 aa
AA seq
DB search
MADAGFFRGTSAEQDNRFSNKDKKLMKEMKFAESLGKKIDMTKVRLEVVKPWVTEKITGI
LGMEDDVVIEYVFNQLEAEKNPDPRKMQIMLTGFLNGKNARIFMGELWDLLLSAQASPSG
IPKQFLDQKKEELKKKMEEEERLQKIQEARRERDKEKEKEKERDRDRDKDREKDRKERRS
RSRDKSSRSSRRDRSRSPRSKDDKKDSKKESSRWDKKEGDKPKEEKKEANGDASSKEKSS
AGKSPKRDGSPKQDAVTASATTAPVTKQEKVEPPPKKDRSDRGERGHSRDRKSGRRSDRS
PRGRSPRKEDDRRRRGSSRKRSSSPRKHSPSHRKRSPSPRKRSPSPRKRSPLERKPSPSP
RKRSPVPRKRSASPPKRSGSPRKRSPSPRSKPRRRPTRSPSSNSESSSSSRSCSRSPLRN
KEDDFEIHRKEDSVLKKRQYRSNRDPSSSEDEGPPHNTGDHRGGGGGGSPRRASPRFARR
SVSPRRGRRSPSPRYRRRSPSPRRHSPSPARFHRRSPSPRTRRSISPKGSPRMRRSPSPR
GRMSPAMRRGRSPSPRRRSLSPRGRRSPSPRGRRSVSPRGRLSHNSRSRRSPSPRGRRSG
SPRRRPLSPPQRYRGSRSRSPVRKKHRSNSRSPRRGGGAAALIPPATKKHNINNASRLMQ
LANYSADTIKEVQYKLTRKNEPNHNASASDDSDSGDTRSDRRASKRRSRSLVDSPSPRQR
RRLDSGSPDGSVEEEEEEDDGSSSRESSPVEKKKKKKKKKHKKKDSSSDSDVSEAEEKKK
KKKDKKKKHKKHKKQKKHKKHRHEESESESEESVGGEELERKLREKALLSMKRQERSSVA
SESD
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgcaggcttcttccgcgggacgtctgctgagcaggacaaccgcttcagcaac
aaagacaaaaaacttatgaaggagatgaagtttgctgagagtttaggaaaaaagattgac
atgactaaggtacgccttgaggtggtgaagccttgggtcacagagaagatcactggcatc
ctgggcatggaggatgatgtggtaattgagtatgtcttcaatcaactagaggctgaaaag
aacccagatccccggaaaatgcagattatgctgacgggtttcctcaacggtaaaaatgca
aggattttcatgggagagctgtgggatttgctgctctctgctcaggccagtccttcaggg
atcccaaaacaattccttgaccaaaagaaggaagaacttaagaagaaaatggaagaggag
gagaggttgcaaaaaattcaggaagcacggcgggagcgggacaaggagaaggaaaaggag
aaagaaagagacagagatcgagacaaagatagagagaaagaccgcaaagaaaggaggagc
cgcagcagagacaagtcatcacgtagctcccgacgcgaccgatcacgttcaccgcgttcc
aaggatgacaaaaaagactcaaagaaagagtcatctaggtgggacaaaaaggaaggagac
aaacccaaggaggaaaagaaagaggccaatggtgatgcatcctccaaggagaagtcttct
gctgggaagtccccaaaacgtgacggttcacccaagcaggatgcagtgacagcatcagca
acaacagcaccagtgacaaagcaggagaaggttgaaccacctccaaagaaggatcgtagt
gatcgcggggagagaggacattcaagggaccgtaagagcggaagacgttcagacaggtcc
ccaagaggcaggtcaccaagaaaggaagatgatcgcagacgtagaggctcctctcggaag
cggtcttcaagcccacgcaagcactccccatcccatcgcaagcggtctcctagcccacgt
aaacgatctcccagtcctcgtaagcgttctcctttggagcgcaaaccctctccaagccct
cgcaagcgttccccagtcccacgcaaacgctctgcctctcctcccaagaggtcagggagt
cctagaaagcggtcaccctctcctagatccaaacctcgcaggcggcccacccgatcccca
agctccaactctgagtcttccagtagttccaggtcttgtagtcgatcacctttgaggaat
aaagaggatgactttgaaattcatcgcaaagaagattctgttctcaagaagcgtcagtac
cggtcaaacagagatccatccagctctgaagatgagggtccaccacacaatactggtgat
caccgcggtggtggtgggggaggctctcctcgccgagcctctcctcgttttgcccggcgg
tctgtctcccctcgccggggacgaaggagtccatcccctcgctaccgccgaaggtctccc
agccctcgacggcacagtcccagtcctgcaagattccatcggagatctcctagtccacgt
actcgacggtcaatcagtcccaaaggcagtcccagaatgcgcaggtcacccagcccccgg
ggtaggatgtctccagccatgaggagggggcgctctcctagtcccaggagaaggtcactc
agcccgcggggtcgaaggtcaccgagtcccaggggaaggagatcagtcagtccaagaggt
cgcttatcacacaactcaagaagccgcaggtcaccaagcccaagaggaagaagatctgga
agtcctcgaaggagacccctgtcacccccacagaggtatcgtggctcccgctcacggtca
cctgttcgcaagaagcatcgcagcaattcaaggtccccacgaagaggaggcggtgctgca
gcactcatcccacctgctacaaagaaacacaatattaataatgccagccgtctcatgcag
cttgccaactactcagcggacactatcaaggaggtccagtacaagctgaccagaaagaat
gagcccaaccacaatgcctctgccagtgatgattcggactccggggacaccaggtcggac
cgacgggcatccaaacgaaggtcgcgctctctggtagactcgccatcaccaaggcagagg
agacgactggattcaggctcaccagatggctcagtggaggaggaggaagaggaagatgat
ggctcctccagcagagagtcttcacctgtggagaagaagaagaaaaagaagaagaagaag
cacaagaagaaggatagcagttccgactcagatgtctcagaggcagaagaaaagaaaaag
aagaagaaagacaagaagaagaagcacaagaaacacaaaaaacaaaagaaacacaagaag
caccggcatgaggagtctgaaagtgagtcagaggaaagcgtcggtggggaggagctggag
cgcaagttaagagagaaggcgctgctctccatgaagcgtcaggagcggtcctctgtggct
tcagagtcagactag
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