Portunus trituberculatus (swimming crab): 123513997
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Entry
123513997 CDS
T07853
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123513997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123513997
03036 Chromosome and associated proteins [BR:
ptru03036
]
123513997
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123513997
Coactivators
SAGA/TFTC/STAGA complex
123513997
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123513997
STAGA complex
123513997
TFTC complex
123513997
SAGA complex
123513997
SLIK complex
123513997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
123513997
NCBI-ProteinID:
XP_045127470
LinkDB
All DBs
Position
37:2190201..2200058
Genome browser
AA seq
605 aa
AA seq
DB search
MSDETQVAPSFPPDSIKVIAESIGISSIGDDVAKEVAEEATFRLRLLVQDGMKYMHHGKR
KRFSACDFDNVLKMKNIEPLYGLQSVEHIPFRFASGGGRELHFLEDKELEINEMVTSQTP
RLPLQMTLKPHWLAIDGVQPTIPENPPPITKDLQKKDSVDPAAKLTAQQDHKDQKHIHGR
GMKSIETVKVKQLATHELSAEQQLYYKEITEACVGSDEPKRGEALHSLAFDPGLHQMVPR
LCTFIAEGIRVNVVQKNLALLIYLMRMAKALLDNQTLYLEKYLHELVPSVMTCIVSRQLC
MKPDMDNHWALRDFAARLISQICKNYNTTTNGLQTRITRVFSKCLNTERTPLSSVYGAVA
GLSELGPEVTKVFVMPKLKALSDKIEQCMEGMNAYDKNAASHIKGLLLKTVAPVLKTLRN
PPDTVNDYKAEYGYLGPQLQVAVVKARQAPPSTATTLTAPIRAITPTTTRIIQQGSMPGI
GGIGSRTVVVNKPPTPGISSQQPGQKVIIMTSRPPTPSQSVNTETVGGVMKTAVVNTGAP
CSTGLTTVTVNPGSLAAGSLSQATVAPQATTHQTTKYVVVSAPNQPSIKTEIKEEPDTQQ
PMDLT
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaaactcaagtggctccctcctttccgccggactcaattaaagttattgcc
gagagtatagggatctcctccattggcgatgacgtggctaaagaggtcgccgaggaggcc
accttcaggctcaggcttttagtgcaggatggcatgaagtacatgcatcatggaaagcgt
aaacggttttcagcatgtgattttgacaatgtcctgaaaatgaaaaatattgaacccctg
tatggactgcagtcagtggaacacatccccttcagatttgcctcaggtggcggaagagaa
ctacactttctagaggataaggagctggaaatcaatgaaatggtaacctcccagactcca
agactgcctcttcagatgaccttaaagccacactggctggccattgatggtgtacaacca
acaatccctgaaaatcctccaccaatcactaaggacttgcagaagaaggattcagtagat
cctgcagccaagttaactgctcagcaagatcacaaggaccagaagcacattcatgggcgt
ggtatgaagagcatagagactgttaaggtgaagcagctagcaactcatgaactttctgct
gaacagcaactgtactacaaggaaataactgaagcctgtgttggatcagatgaacctaaa
agaggggaagccctacacagtttggcctttgatcctggactgcatcagatggtgcctcgc
ctctgtactttcatcgcagagggaataagagtgaatgttgtccagaagaacttggccctt
ttgatctacttgatgaggatggctaaagctctcctagataatcaaacactttatctggag
aaatatcttcatgagctggttccctcagtgatgacttgcattgtgagtagacagctgtgc
atgaagccagacatggacaaccattgggctcttcgagactttgctgctcgtctgatttct
cagatttgcaaaaactacaacaccaccacgaatggtctccagactcgcatcaccagagta
ttctccaagtgccttaatacagaaagaacaccactatcatcagtatatggagcagttgct
ggattgtcagaacttggcccagaagttaccaaggtgtttgtgatgccaaaactaaaagcc
ctaagtgacaagattgaacaatgcatggaaggaatgaatgcctatgacaagaatgctgct
tcccacatcaagggtctcttgctgaaaacggtagcaccagttctcaagacacttcggaat
cctcctgacacagtgaatgactataaagctgaatatgggtacttaggtcctcagcttcag
gtagcggtggtcaaggctcgccaggctccaccttccacagccactacactcacagctccc
attagagccatcacaccaaccacaacacgtatcattcaacaaggaagtatgccaggaata
ggtggcattggttctcggacagtggtagtcaacaagcccccaactccaggcattagttcc
cagcagcctggtcagaaggttatcatcatgacttccagaccacccacaccaagccagagt
gtgaacactgaaactgtgggaggagtaatgaagacagccgtagtcaacactggagcccca
tgttccactgggctcactacagtcacagtcaaccctggtagtctggctgctggatccctt
tctcaggccacagtggcaccccaggccactacacaccagaccaccaaatatgtagtggtt
tcagctccaaatcagccctcaattaaaactgaaatcaaggaagaacctgatacccagcag
cccatggatctgacgtga
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