Portunus trituberculatus (swimming crab): 123514166
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Entry
123514166 CDS
T07853
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03410
Base excision repair
ptru03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123514166
03450 Non-homologous end-joining
123514166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123514166
Enzymes [BR:
ptru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
123514166
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
123514166
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
123514166
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
NTP_transf_2
CENP-T_N
HHH_5
BRCT_2
Motif
Other DBs
NCBI-GeneID:
123514166
NCBI-ProteinID:
XP_045127751
LinkDB
All DBs
Position
37:26326156..26353053
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AA seq
550 aa
AA seq
DB search
MKRKNKGALPPAKQHKAEGKTHEPPPQFLAGLKCHIHPANFGLMRHKVFENHITRYGGEL
VLSLPDCSEAVFHIVFEETVDEEKVKRLVDTARLPNCVFLKCTWLIESIKAKTKAGIESH
LIMPITSVEDQCRGTDESWLQGICQTQVEDAEKAHIKNTDAAKSELQRNENPNVQDCSAK
ITAHSALHEQKENVESQTSAEETKEDKSVEDEREPEECSGNEVQQNRSVLHKWGARVGEE
DHMESLIRPFPKNLQDKFACARPSSSKPVDLNAHITSELGKLAATYKSKNDTWRAVGYER
AVTAIRNYGKEITSREEALAIPGIGGRLADKIAEILESGRLRKVAEVCEGEEAETLRLFL
GVWGAGPSTAQAWYLQDYRTLDDLRTKATLTRHQQIGLKHYDDINSRIPRSEVAEIEDYV
REATLSLVRGAEVMVCGSYRRGKLTCGDVDVLITHPDGHSHELIFRPLLAQLRDSGFVTD
DLVTQEDNGKSMRLLATKKGMSLSEHSLRAGIVRQTGEKLSDGYMLDTPTEESIFTHLGL
EYHPPEERDH
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaagaacaaaggggcacttccccctgctaagcaacacaaggctgagggcaag
acacacgaaccaccaccacagttccttgctggtctgaaatgtcacatccacccagcaaac
tttgggctgatgcgccataaggtgtttgagaaccacatcacacggtatggtggagagctg
gtgctatccctgcctgactgctctgaggctgtgttccatatagtgtttgaggagactgtg
gatgaggagaaggtgaagcgtctggtggacacagcaaggctccctaactgtgtattcctg
aagtgcacctggctgatagagagcatcaaggccaagaccaaggctgggattgagagccat
ttgattatgcccatcacctcagtggaggaccagtgcagaggaacagatgaatcatggcta
caagggatctgccagacacaggtggaggatgcagaaaaagcacacattaaaaatacagat
gctgcaaagtcagagttgcaaagaaatgaaaaccctaatgtacaagattgttcagctaag
atcactgctcactcagccttgcatgagcagaaggaaaatgtagagagtcagacaagtgct
gaagaaaccaaagaagacaaatcagtggaggatgagagggagccagaagagtgcagtgga
aatgaagtgcagcagaacaggtctgtgcttcacaaatggggagcaagagtgggtgaggag
gatcacatggagtcgctgataagaccatttccaaagaatttgcaggacaagtttgcctgt
gcccgtccatcaagcagcaagcctgtagatctcaacgctcacatcacctcagagttgggc
aagctggccgccacctacaagagtaagaatgacacctggcgtgctgtggggtatgagcgt
gctgtcactgccatccggaactatggcaaggagatcacatccagagaggaggcactggca
atacctgggattggtgggcgcctggcggacaagattgctgagatcctggagagtggacga
ctgaggaaagtggctgaggtgtgcgagggggaggaggctgagactctgcggctgttcctt
ggggtgtggggagctgggccctccactgcacaggcttggtacttgcaggattaccgaacc
ctggatgacctgaggaccaaggcaacactgactcgccaccagcagattggcctcaagcac
tatgacgacatcaactcgcgcatcccacgctctgaagtggctgagatagaggactatgtg
cgagaggccaccctgagtctggtgaggggagctgaggtgatggtgtgcggctcataccgg
cgagggaagctgacctgtggtgatgtggacgtcctcatcacccaccctgatggccactca
catgaactaattttccggccgctgctggcacaactcagagactcaggcttcgtgactgat
gatcttgtcactcaagaggacaatggaaaatccatgagactgcttgccaccaagaagggc
atgagtctgtctgaacacagcttgcgagctggcattgtgaggcagactggagagaagctg
agtgatggctacatgctggacacacccacagaggaatcaatctttacacaccttggcttg
gaatatcatccacctgaggagagggaccactag
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