Portunus trituberculatus (swimming crab): 123514208
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Entry
123514208 CDS
T07853
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38-like isoform X1
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptru01002
]
123514208
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptru04121
]
123514208
Enzymes [BR:
ptru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123514208
Peptidases and inhibitors [BR:
ptru01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123514208
Ubiquitin system [BR:
ptru04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123514208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Usp38-like_N
UCH_1
Motif
Other DBs
NCBI-GeneID:
123514208
NCBI-ProteinID:
XP_045127823
LinkDB
All DBs
Position
37:12302748..12323782
Genome browser
AA seq
1523 aa
AA seq
DB search
MIPLKAVARPRLKWIANMDKLVSDIIHMSNQPDNIKKALLIKLAHSPRVNMSRTVLEKAN
IMAIFDTCVNIATTSENEGPLAVFAFSHWASQYKACLKEYLTPERVTGILACQTNATVII
AWLKEALCHLTEDTDVLCTLAPVLEEVLQNKLRECGGSSAFVMQLAELYALCPVLLPQPH
TRLTFTITLMNCVAAFPTPTKPEVLAHMKSIGGLVNTLWNGLRLEDILFSLNAMYTIISN
TDGGSEVCPAMAHLLSLVPTVVVECLAPRIVSDTSTTDAALLATLTRLTAWLVAWPTAHT
TLGLWVRTLVRLLYQSGRTIIPARVTLDRVPKLLTALQIPVVRTGVVSVLSTLLLSFQSS
PTAFHKVIPAMVDVFGQLEREGSPSSTATLGRLATLCHTLMALHPGQPDIYQPLMNCLEK
YPAPSEEDIQEVIQEHQWGPMEEGARGLGPGQARNSAGVSEVPFVYQQRLPDQKVGLRNL
GNTCYMNSVIQALFMTDSFRHGILRAVPRSNQQLLVQLQHLFSMLCFTHRTYVAPRHFHD
KSRPSWFSPGMQQDCSEYLRHLMITLHEEERAGQALPEYQERVIIESETASLASDLQPLP
YDSATEDFVEGEQALKADGGEETQGITITPAGALQTGSEDGIVLRDLKSVNAEEDALTYN
RKKMSVHMQSFKGYLQGEPMEGVHHGDQMPPAGECLVKEVLEETDDADMVDATMPQSHNE
DADQVMHNLCDNKKITHSCLPQDIEQRLDIVEMDTTPESSSKSMNYKRKHNTTPDSVTRQ
MLKSPKGDMTSDIDNSSDSGISGDLAEDGEIHINSPNPSSPLSKEVCPETKGLTIEELVS
NISNNEDNENEYFVSLVHKVFGGKLATCIKCLQCKTESIHKDVFTDIHLAFQDTDRYSAA
DAIRKNPSRLVRQADKEHSGELSIEDLIRSYLTSERLTGENQYECERCGGKQDAERSIQI
LEPPEHLILTQLRFYYDTARGQRQKVFTNVEFGEELLLPIRYSTQGSFEQDLNPGSEETS
VSGESENRRQQGYATEVTEGQSSLSDSITSIQGHSSLSSANTAAYPITIGDSSEQSYQLC
KNSSGQIQHNNSESGSTSTHDIEEASSCSSINSLQEIIFSNSKKEMREHENIKSADKDSV
QVTDGLPGFKQTSKPCSTNTSTITTSTSSNTSSGNSNDNKCHSKPGMLNDKNSKPSECYR
DNKKKCVTEGNNLSSRHETSLANASDESRVSVDCACENQSECSGTSGKIIKGSYVELGLT
NSTVRNVQPSCSYSLGFVPDIRNGFVNNDRFKGDINRSLQEDSSTGFCASPQHSSQPDCS
CRTITSLPQTTSMSTGSSDCFSSKDECEDTQDVTYARYALYGVVVHSGFSSEGGHYYCYA
RNSSVAALPESARESHGILGGWYNFNDEKVTSTTFSNITSLTRTFNRDTAYQLFYKKLSD
CLTPEVPLMEEFKCLRLDLQEAVENDNLQFRSEQEREAQRRRHQVPGHSPFSRYSDHDDT
PPPGGCGAGPGGGSFNTASRVVF
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgattcccctcaaagcagttgcaagaccaagactaaaatggattgccaacatggataaa
ctggtgtcagatattatacacatgtccaatcagcctgacaatatcaaaaaggctctgctc
atcaaattggcccattccccaagagtgaacatgagcaggacagtgttggagaaggccaat
ataatggcaatctttgacacttgtgtgaatattgccactacctctgaaaatgagggaccc
cttgctgtgtttgccttcagtcactgggcgagtcagtataaggcttgcctgaaggaatac
ttgacacctgagcgggtgacgggcatccttgcctgtcagaccaatgctacagtgatcatt
gcctggttgaaggaggctctgtgccacctgacagaagacacagatgtcttgtgtaccttg
gcaccggtgctggaagaagtactacagaacaaattacgggagtgtggtgggagttcagcc
tttgtaatgcagctggcagagctttatgccttgtgtcctgtactcctgccacagccacac
acccggctcaccttcaccatcacactcatgaactgtgtggctgccttccctacaccaact
aaacctgaggttcttgcccacatgaagagtattggtggcttggtgaacaccctatggaat
ggtttgagactggaggacattctcttctcccttaatgccatgtataccattatatctaat
actgatggagggtcagaggtgtgtccagccatggcacacttgctatcactagtgcctaca
gtggttgtggagtgcctggccccacgcatagtgtctgacaccagcaccacagatgctgca
ctcctggccaccctgacacgtctcacagcatggcttgtggcctggcccacagcccacact
acgctaggtctgtgggtgcgcacactagttcgcctcctgtaccagagtgggagaaccatt
attcctgccagagtcaccctggacagggtacccaagctactcactgctctccaaatacct
gtggttcgtacaggagttgtctctgtcctttccactctcctgctgtcattccagagttcc
ccaacagcatttcacaaggttatcccagcaatggtagatgtgtttgggcagctggagagg
gagggatcaccgtcttcaactgcaacccttggtcgtctggctaccctctgccacaccctc
atggctctccacccaggccagccagacatttaccaacccctcatgaattgtttggagaaa
tatccagctccctcagaggaggacattcaggaggtgatccaggaacaccagtggggaccc
atggaggagggagcacgaggtttgggaccaggacaggcgcgcaactcagcaggggtcagt
gaggtgccttttgtgtaccagcagcggctacctgaccagaaagttggcctccgcaactta
ggcaacacttgttacatgaactctgtgatacaagctctcttcatgactgacagctttcgt
catggcatcctacgggctgtaccacgaagcaaccagcaactcctagtgcagctgcagcat
ctcttcagcatgctgtgctttactcaccgcacttatgttgctccacggcatttccatgac
aagtccaggccctcgtggtttagtccaggcatgcaacaggattgttcagaatacttaaga
cacctcatgataacccttcatgaggaggaacgtgctggccaggccctgcctgagtatcag
gagcgggtcatcattgagagcgagacagccagcttagcgtcagacctccagcctttgcct
tatgactcagcaacagaggactttgtggagggtgagcaggcccttaaggctgacggtgga
gaggagacacagggcatcaccattactcctgctggtgcactgcagactggtagtgaagat
ggaattgtgctgagggacctgaaatctgtgaatgctgaggaggatgctcttacttataat
aggaaaaagatgtctgttcatatgcagtcatttaagggatacctgcagggagaacccatg
gagggagtgcatcatggggatcaaatgcctcctgctggagaatgcttagtgaaggaggtg
ttggaggagacagatgatgcagacatggtagatgctactatgccacagtctcacaatgaa
gatgcagatcaagtcatgcataatttatgtgataataaaaaaattacacatagctgcctc
ccacaagacattgaacaaagattagatattgtggaaatggacactacaccagaaagttct
tcaaagtctatgaactacaagcgcaagcataatacaacaccagacagtgttacaaggcag
atgttgaaatctcctaaaggagacatgacctcagacattgataacagctcagacagtggc
atcagtggagatttggcagaggatggagaaatccacatcaatagccccaatcctagcagt
cctctctctaaggaagtgtgtccagagaccaagggcctgactattgaggaactagtgagc
aatatatccaacaatgaggacaatgaaaatgaatactttgtaagtttagttcacaaagtg
tttggtggaaaattagcaacatgcattaagtgcttacagtgtaaaacagaatccatacac
aaagatgtcttcacagacattcatctagcattccaggacactgatcgctacagtgcagct
gatgctatcaggaaaaacccaagtcgacttgtcagacaggctgataaagaacattcagga
gagctaagcatagaagacttgatcagaagttatctgacttcagagagattaactggagaa
aatcagtatgaatgtgaacggtgtggaggaaagcaggatgctgaacgttccatccagatt
ttggagcctccagaacatctcattctgacacagttaaggttctattatgacactgcccgt
ggacagcgacagaaagtgttcaccaatgtagagtttggagaggagcttctgcttccaatt
cgatactcaacacaagggtcttttgaacaagatcttaacccaggaagtgaagaaacttca
gtctctggagaaagtgaaaacagaaggcaacagggatatgcaacagaggttacagaaggt
cagagctccctttcagatagcataacatccattcagggacactctagcttatcaagtgca
aacactgcagcatatccaatcactattggtgattctagtgaacaaagctaccagctttgc
aaaaattcctcaggtcaaattcagcataataattctgaaagtggcagtactagtactcat
gatattgaggaagcttccagttgttctagtataaatagcctacaagagatcatctttagt
aatagcaaaaaggaaatgagagagcatgaaaatatcaaaagcgctgataaagattcagta
caggtgacggatggtttgccagggttcaagcagacctcaaagccatgtagcaccaacacc
agtactattaccactagcaccagcagtaacaccagtagtggcaacagtaatgataacaaa
tgccattctaaacctggcatgttaaatgacaagaacagtaaaccaagtgaatgctacaga
gataacaagaaaaaatgtgtaactgaaggaaataatttatccagtagacatgaaacttca
ttggcaaatgcttcagatgagtctcgtgtgagtgttgattgtgcttgtgagaatcaaagt
gagtgtagtggaactagtggaaaaattattaaaggctcatatgtagaactgggtctaaca
aattctactgtcaggaatgtgcaacccagttgcagctattcattgggctttgttcctgat
attaggaatggttttgttaataatgacaggtttaaaggtgatattaataggtctttgcaa
gaagactctagtacaggattctgtgccagcccacaacacagctcacagccagattgcagc
tgtagaacaatcacaagcctcccacaaacaacatccatgagtactggatcatctgattgc
ttctcctctaaagatgagtgtgaggacactcaagatgtaacctatgcccgctatgccctc
tatggggtggtggtgcactcaggcttctcatctgaaggtggccactactactgctatgcc
aggaactcttctgtggctgccctccctgagtcagccagagaaagtcacgggatacttggt
ggttggtacaacttcaatgatgaaaaagtgaccagtacaacattctccaacattaccagc
cttacccgcacctttaacagggacactgcatatcaactcttttacaagaagctgagtgat
tgtctgacgcctgaggttccactgatggaggaattcaagtgcttacgcctggacttgcag
gaagcagtagaaaatgacaatctgcagtttcgcagtgagcaggaacgagaggcccagcga
cggcgccaccaggtgccaggccactcacccttctcccggtattctgaccatgatgacact
cctcctccaggggggtgtggggcagggccaggtgggggtagcttcaatacagcctctaga
gtggtgttctga
DBGET
integrated database retrieval system
