Portunus trituberculatus (swimming crab): 123514578
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Entry
123514578 CDS
T07853
Name
(RefSeq) remodeling and spacing factor 1-like isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123514578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptru03036
]
123514578
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
123514578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WSD
PHDvar_NSD
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
123514578
NCBI-ProteinID:
XP_045128470
LinkDB
All DBs
Position
38:complement(2874484..2924077)
Genome browser
AA seq
2673 aa
AA seq
DB search
MASNDEDLCTSHADFAVICSFVEKFGEKLGLTLPNIGELQSSLEDTDNVSPIVSQCVSQL
LRRINKSVKLDRWERGLQRFAHSYSHQDGWELERFGFKKAKLEVKIRVLKTLLEAQFDLY
KSFKDKVNSLSANELRLQPCGRDKKGVSYWCQLDECANLRVYSDDQDEETWTLVASTREE
LVTLIAELESESPPGASREMSVEGSHSGTVTPMGLSEAPTPVDSKAPTPVGSKAPTPVPS
GRTSPVIDTGQDKENEKKDRVDEKKILTKEVEEESEERVTQKLEVEKEMSDVGNETIVDT
ECKLGKEKISEEVLDVKAKDKEVLDVSLSEAPKEDFNKSEKSSTKLPPTLEEVEEKQIRK
EAKMQEFSLKDEGKSTQLTHKAEEKMDNKTEEKKMDNKSENNKVDNKTEEKKVDNKTEEK
KVDTVTNMEIENEAVFEKVGQVAEKVKLKMEEEADKGKKKIESPSETEKSEKENSTKEIS
LKAEIVESTIEKTEMKTEVEKETEISQNADEKIDKKNEGERAEVSEKAAKETDKVKSEGE
KKVEIAENCDAKADKVMNEGEKKPEILENSDKKIDQVKREEEKKEETAGGTDMKQDKVEG
EGEHKAETIEKKVSNSQENEESEKHINKSKKKGEDKEGKGETSKGQVEQTGRIEAEGTQS
QKGLQVEQQKSGCAENVMEGKEKKADEGIYSKKGGKLPEPMEVDDDTKGLCLDIAAKKTM
LVRERGSQDGPESKGPRFGSTERTEPKKKESVWDKLNKMKEKGEAKAEDAGEKKVEAISC
LPPCADKLPKEEKQEQPSHNIPKEDSKTKPSTNAFSFQRAWEDKTTSKPAPSVPSESGVA
PSRQQQAPKLMSIESLVGPSTRLPSSSVSQPVPAVIRSSTAGLPATTKDDTTEPPLKKFK
FSDMSSLESHSESRSSDSSSREAPPSDAPLPPLPQAAKEGKDCTIQKEKRNEKVESLPGG
KARDTRKDEKVEHLPPVKSAQSEEKDHQKEKDTKSSTQPENLAQDKSDKGSSYSKDEGNK
EASENSSHAEDKMTKQKEEESMEINKIKSKDHTPTTEITSKADTHIPDKADKIADATTVS
DGDSKMVCQDGDSSKSSMHKSNENPPLDAKEDCGNETIEEPVMLIKGDGEGAACEAGNDP
YHTVEPWWEYFDENDSTKGSVGETIEEDVMYFWGEGAGAECEAGNNGDETETNSDANKQG
EGGGSGGTVATEGQRNTSAAELKPSKEVEDVKPDGEVKAVDGVCEGDEAKVNGLRTVESV
EKTEKSTSQEDPSEGLADTRHASVNGKKVNEENSVGDEHRDGLPVKVTSPGCEKVKEEKK
EENAEQILDGTQDSKNCKANISGDVKVEGDEVKSSKVGKEEGKIKKETVKDKSGSEGEED
EVEEEEMEEEEEVEAEEEEEEEEEEEEMEDEENEDEEEERSRKKSKGKKESSHRRKQDQH
DSAVGQQGAKRGRGRPHKRSVEQQESDQEEDEEDENDPNEDNDEPEGDERESGHAAPPAK
KRRQRGKGSTARPLPDVPRQKSARIAKIREKEEQERRELEAIRLKQLAEENRMREIKRKA
REERRSQREMKKGRREKKEKKDREKKKRKKKKRGKKKKTSNDPWAHSSTSSSSSSEEEEE
DLEEDEEDEKLVFKSDHEFSPESDIEEDAQPIKRARTAKKLTSESEVEEEGDEEEEEEED
ETQCTKCGHDDHPETILLCDNCDAGWHLSCLRPPLLSVPEGDWVCPTCEHVLLVNKLRTL
LQEFDECQKRAQNEELRRQRLAYVNVSLSNVLPEGKKKKKHRDGEEYDDDENESDSDSDD
DSDSESDDSSDSSSQSSSDSTAPLYTLRARSARTLKEQVENFDEMINEAIRDEMEAAAGA
GNAGRGKDIENIMQANEEEMVENEGLFEVEEEVGEQEDKESKEVEPPVSKEECEGKRERE
KDEDEDEDEVAPKRKKSKPTEEGSGDDDNYRVSEEEQADSDSEEDIKISRRPYVSVSIKK
RRRLTDLDAEDDDDASDEDFMNSSEEEEDETEESLESSSSITTDLESDDSDVVDMKRRRS
GRYEHLPLRRSARNRRGRFGDEDSENEERIYKRQKNKKKKKHKHSSSEEEEESSDSDGSY
RKKKVRRRKKPPLKLRGKRGSKGKSRKKIAKAKPKPKKEASGDGGENKKPAKPRIKYAKP
PKSKQDDEEEEVSQRRVTRGRQVNYYDALMMSDETEEEEPKKKWRGKVMKGERVPTESSE
YEASDDERMKRRGVSGGLGKGKVMKGEEEDEERFEKGKKKRGRPKKAEELLGKPSIIKVA
AMDTTPAPAARPVQSLPTVSLPVTKIDTVAPVIPTVTQTAVTSTPPVQVTPSILSVAITS
PTTGVPTPPATALPISADSPSHNTPEPAASTPPTTPAPAAPSKALPATITPAAANIGSSS
PIHQPVGKWSPHLSGVGGTPSTPPRSGGAPGAATPPRPGLPPAPVTASPPPPYRSSPLPM
TQGGPGIPPCSSAPSNITQGGPPPTTSALSQVYAPYRPPPPEHFPAHPAFPGYAPPGRHS
PSPHTTRHPAHLPPGHPLPRMPPSYGPPPLTSVPGQGPYPSRGISSHPGVLRGPPHELYR
APPGGLPGHGSPSHPGHPHLIMKPSYPGLEPLPYSGSPGPSPLSLHQGSQGSPAHHSASE
DSKEEMHPSGKGPGEFSSGLMSYFSSQRDDDIE
NT seq
8022 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaatgatgaggacttgtgtaccagccacgcagatttcgccgtaatatgttct
tttgtcgagaaatttggagagaagctagggttaactcttcccaacataggcgagctccaa
agttcactagaagacacagataacgtaagtcccattgtctcacaatgtgtgagtcagctt
cttagacgcatcaacaagtctgtcaagttggatcgctgggaaaggggtctccaaaggttt
gcacactcctactctcatcaagatggttgggaactggaacgctttggtttcaagaaagct
aagctggaagttaagattcgtgttttaaagactctccttgaggcacagtttgatctctac
aaaagtttcaaggataaggtaaattcacttagtgcaaatgaattacgtcttcagccatgt
ggacgggacaagaaaggtgtttcctattggtgccagctggatgagtgtgccaatctgcgg
gtgtactctgatgaccaggatgaggagacgtggacccttgtggctagcacaagggaggag
ctggtgactctgattgcagagctagagtcagagtctccacctggagccagcagagaaatg
tcagttgaaggcagccacagtggcacagttactcctatgggactaagtgaagccccaaca
cccgtggatagtaaagctccaacccccgtgggcagtaaagctcccactcctgttcctagt
ggacgaacttcacctgttattgacacaggccaggataaagagaatgagaaaaaagacaga
gttgatgagaaaaagatattaacgaaagaagtggaggaggagtcagaagagagagttaca
cagaaattggaagtagagaaggaaatgtcagatgtggggaatgaaactattgtagatact
gagtgcaaattaggaaaagaaaagatatcagaagaggtgttggatgtgaaggctaaagac
aaagaggtgctagatgtgtctctgtctgaggcaccaaaagaagactttaataagtcagag
aaaagttccacaaaacttccaccaaccttggaggaagtagaggaaaagcagattaggaaa
gaagctaaaatgcaagagtttagcttgaaggatgaagggaaaagtacacaattaacacat
aaagctgaagagaagatggataataaaactgaagagaaaaagatggacaataaatctgaa
aataataaggtggacaataaaactgaagagaaaaaggtggacaataaaactgaagagaaa
aaggtggacacagtgactaatatggaaatagaaaatgaagcagtttttgaaaaggtggga
caggtagctgagaaggtgaagttgaaaatggaagaggaagcagataaagggaaaaagaaa
attgaatcccctagtgaaacagagaagtctgaaaaggaaaatagtaccaaggagatcagt
ttaaaggctgaaatagtagaaagcactattgaaaaaacagagatgaaaactgaagtagag
aaggaaactgaaatatcacaaaatgctgatgagaaaattgacaagaagaatgaaggagaa
agagctgaagtatcagaaaaagctgcaaaggaaacagacaaggtgaagagtgaaggagaa
aagaaagtagaaatagctgaaaactgtgatgcaaaagcagacaaggttatgaatgaagga
gagaagaaacctgaaatattagaaaacagtgataagaaaatagaccaggttaaaagggaa
gaagagaagaaagaagaaactgcaggaggtaccgacatgaaacaagacaaagttgaaggt
gaaggagagcataaagctgaaaccatagagaaaaaggtttctaacagccaggagaatgag
gagagtgaaaaacatattaataaatcaaagaaaaagggtgaagacaaagaagggaaagga
gagacatctaaaggacaggtagaacaaacaggtagaatagaggctgagggcactcagtct
cagaaagggttgcaggttgagcaacaaaaatctggctgtgcagaaaatgtgatggaaggt
aaagagaagaaagcagatgaagggatatatagtaagaagggcggaaaattgccagagccc
atggaggtggatgatgatactaaagggctatgccttgatattgctgctaagaagaccatg
cttgttcgtgaaagaggttctcaggatggacctgaaagcaaaggccccaggtttggctca
acagaaagaacagaacctaaaaagaaggagagcgtttgggacaagctgaataaaatgaag
gaaaagggtgaagcaaaggctgaagatgcaggagagaaaaaggtggaagctatttcatgt
ttgcctccttgtgcagataaacttcccaaagaagaaaagcaagagcagccatcacataac
attcccaaagaggactcaaaaacaaagccatccaccaatgctttctcctttcagcgtgct
tgggaagacaaaaccacaagtaaacctgctccttcagttccatctgaatctggtgttgct
ccctcaaggcagcagcaggctccaaagttgatgagcattgagtcactagttggtccttct
accaggttgcctagctcctctgtttcccagcctgtcccagctgtcatccgatcctccaca
gcagggctgccagccactactaaagatgacactactgaaccaccactgaaaaagtttaaa
ttttctgacatgtcatcattggaatctcactcagaatctcgttcatcagactcatcttcc
cgagaggcacccccatctgatgcaccactaccaccattaccccaggcagctaaagaagga
aaagattgtaccatacagaaagagaaaagaaatgagaaagttgaaagtttacctggaggc
aaagctagagatactagaaaagatgaaaaagttgaacatttacctccagtcaaatctgca
caatctgaggaaaaggatcatcagaaagaaaaggatacaaagtcatcaacacagccagaa
aatcttgcacaagataaatctgacaagggaagtagttactctaaagatgagggaaataag
gaagctagtgagaactcttctcatgctgaagataagatgacgaagcagaaggaagaggag
agcatggaaataaataaaatcaagagcaaggaccacactcctaccacagagataacatca
aaggcagatacacacattccagacaaggcagacaaaatagcagatgctacaacagtatca
gatggagacagcaaaatggtctgccaggatggtgacagttcaaaatcctctatgcataag
tcaaatgagaacccacccttagatgcaaaagaagattgtggtaatgaaacaattgaagaa
ccagtgatgttaatcaaaggtgatggagaaggggcagcttgtgaggcaggtaatgatcca
taccatactgtagagccatggtgggaatattttgatgagaatgatagcaccaagggttca
gtaggagaaacaattgaggaagatgtcatgtacttctggggagaaggtgcaggtgctgaa
tgtgaggctggaaataatggtgatgaaactgaaaccaactcagatgcaaacaagcaaggg
gaggggggagggagtggaggaactgttgcaacagaaggccagagaaatactagtgctgct
gagctgaagccctctaaggaagtggaggatgttaagcctgatggtgaagttaaggctgtg
gatggagtgtgtgaaggggatgaggctaaagtaaatggtcttaggactgtggaatcagtg
gagaaaacagagaaatccacatctcaggaagatccatcagagggccttgctgatactagg
catgctagtgtgaatgggaagaaggtgaacgaggaaaactctgtgggtgatgagcatcgt
gatggattaccagtgaaggttactagtcctggttgtgagaaagtgaaagaggagaaaaag
gaagaaaatgctgaacaaattcttgatggaacgcaggactccaaaaattgtaaagcaaat
attagtggtgatgtgaaggtggaaggtgatgaagtgaagtcaagtaaagtagggaaggaa
gaagggaaaatcaaaaaggaaactgtgaaggataaaagtggttcagaaggagaggaagat
gaggtagaggaagaggaaatggaagaggaggaggaagttgaggcagaagaggaggaggaa
gaggaggaggaggaagaggaaatggaggatgaagagaatgaagatgaggaagaggaaagg
agtagaaagaaaagtaaagggaaaaaagagtcatcccacaggagaaaacaagatcagcat
gactcagcagttggccaacagggtgctaagcggggtcggggccgtccacacaagagaagc
gtagagcagcaagaaagcgaccaagaggaggatgaggaggacgagaatgatccaaatgag
gacaacgatgagccggagggagatgagagagagtccggccatgctgcaccccctgccaag
aagcggcggcagcgtggcaagggcagcactgccagacccttgccagatgtgccaaggcag
aaatctgcacgtattgccaaaatccgagagaaggaggagcaggagagaagagagctggag
gcaatcagactgaagcagttggcagaggagaatcgcatgcgtgagatcaaaaggaaggcc
cgagaggagaggaggtctcagagagaaatgaagaaaggaagacgtgagaagaaagaaaaa
aaggacagagagaaaaagaagcggaaaaaaaagaaacgcggaaaaaagaagaaaacttca
aatgatccttgggcccactcttctacatcctccagttccagttcagaggaggaagaggaa
gatctagaggaagatgaggaagatgaaaagcttgtgttcaagagtgatcatgagttctct
ccagagtcagacattgaggaggatgcacagcccatcaagagggctcgcactgctaagaaa
ttaacaagtgaaagtgaggtggaagaggaaggtgatgaggaagaggaagaggaggaagat
gagacacagtgcaccaagtgtggtcatgatgatcacccagagaccatcctgttgtgtgac
aactgtgatgctggctggcacttgtcatgtctgaggcctcccctcctcagtgtaccagaa
ggggattgggtgtgcccaacttgtgaacatgtactgctggttaacaagcttcggaccttg
cttcaagagtttgatgaatgccagaagagagcacagaatgaggaactgcggcggcagagg
ctcgcctatgtcaatgtgtctttgtcaaatgtattacctgaaggaaagaagaaaaagaag
catagagatggtgaagagtacgatgatgacgaaaatgaatctgattcagactctgatgat
gactctgacagtgaaagtgatgatagcagtgattcttcaagtcagtcatcatcagattct
accgcacctttatataccttaagagctcgcagtgcacgcactctcaaagaacaagttgaa
aactttgatgaaatgattaatgaggcaataagggatgaaatggaagctgcagcaggagct
gggaatgcaggcagaggtaaagatattgaaaacatcatgcaagcaaatgaagaagaaatg
gtagaaaatgaagggttgtttgaggtggaggaggaagtgggtgagcaagaagacaaggaa
agtaaagaagttgaacctcctgtttcaaaagaggaatgtgaaggaaagagagaaagagag
aaggatgaagatgaagatgaagatgaagttgctcctaaaagaaaaaaatcaaagccaaca
gaagaaggcagtggtgatgatgacaactacagagtgagtgaagaggagcaggcagattct
gattcagaggaagacatcaaaatatcaagaagaccgtacgtgtctgtctccatcaagaag
cgacggagactcactgacctggacgccgaagatgatgatgatgccagtgatgaagatttc
atgaactcaagtgaagaggaagaagatgaaacggaagagtccttagagtcttcttcctcc
atcacaactgacctggagagtgatgactcagacgttgttgatatgaaacgccgccgaagt
ggccgatatgaacatttacctttgcgccgatcagcacgcaacagaagaggccgctttggg
gatgaagacagtgaaaatgaagaacgaatttacaaaagacaaaagaacaaaaagaagaaa
aagcataagcacagctcaagtgaggaggaggaagagagttcagacagtgatggaagttac
agaaagaaaaaagtgagacggagaaagaagccacccttgaagcttcggggcaagagaggc
agcaaaggcaaaagcagaaagaaaatagctaaggcaaaacccaaacccaagaaggaggca
agtggagatggtggagagaataaaaagcctgcaaaaccaagaataaaatatgcaaaacca
ccaaaatctaagcaagatgatgaagaagaagaagtgtctcaacgtcgagtgacacgagga
agacaggtcaactactatgatgctctcatgatgtctgatgaaactgaggaggaggagcca
aagaagaaatggagaggaaaagtgatgaaaggggagagagtgccaacagagagcagtgaa
tacgaagcctctgatgatgaacggatgaaacgccgaggagtaagtggagggcttggaaaa
ggcaaagtcatgaaaggggaggaagaagatgaagaaaggtttgaaaaaggcaagaaaaaa
cgaggtcggccaaagaaagcagaagagcttcttggcaaaccttccattattaaagtagct
gccatggacaccactccggctccagcagctcgtcctgtgcagtccctccctactgtatca
ttacctgttacaaagattgacactgttgcacctgtaatacctacagttacacaaactgca
gttacctctacccctcctgtgcaagttacaccctctatactatctgtagccataacttct
ccaaccactggggtgcccacaccacctgctacagcacttcctatttctgctgactcacct
tcacacaatactccagaaccagctgctagtactccacccaccacaccagcacctgctgca
cccagcaaagctctgccagctaccattactccagcagcagccaatataggaagcagcagc
ccaatacatcaacctgtagggaagtggtcacctcatttatctggagttggagggactcct
agcacaccacctagatctggaggtgccccaggggctgccactcctccacgtcctggtctc
cctcctgcaccggttactgcctcacctccacctccatatcgatcatctccattgccaatg
actcaaggtggaccaggcattcccccatgcagctcggcccccagtaacatcacacagggt
ggtcctcctccaactacatctgctttatctcaagtttatgcaccttatagaccaccacca
ccagaacattttcctgcccatccagcatttcctggctatgcaccccctggtagacactcc
ccaagtccccacacaactcgtcatcccgcccatcttccccccggtcacccacttccccgt
atgcctccaagctatggccctcctccccttacaagtgtacctggccaagggccatatccc
tccagaggaatttcatcacatccaggagtattacgagggcctccacatgaattatatagg
gcacccccaggaggtctcccaggacatggctcccccagtcatccaggtcatcctcatctc
atcatgaaacctagttatccaggactggaaccactaccttactcaggctctccggggcca
agtcctctcagtctacatcaaggctcccagggctcaccagcacatcattcagccagtgaa
gatagtaaagaggaaatgcatccttcaggcaagggtcctggagagttcagcagtggcctc
atgtcctacttctcaagccagcgtgatgatgacattgagtga
DBGET
integrated database retrieval system
