Portunus trituberculatus (swimming crab): 123515003
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Entry
123515003 CDS
T07853
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123515003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123515003
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123515003
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
123515003
NCBI-ProteinID:
XP_045129262
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Position
38:27466112..27514212
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AA seq
430 aa
AA seq
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MAEVQDDDQWLYGDDKDESREEEGELNEKGDEKEKTAEENGKEDSAAEGSGEGQDAGKDK
DEDMDKDKDKDGEDREDKDKDGTNDDAEKGDDDSSDEDDVTITIGALKTQPDIIQAPTAS
HPVRFQHKTAPSAGLKDEDFTSPGKVNGVPITEFSMAELEEKPWRKPGADISDYFNYGFN
EETWFRYCERQKRMRINESGAGLAGLGISITKPFGNTPNTIPVTIVNDNSKYGGSGSQRP
KAGPPPRNKGMGQIDVIGGASNPNKTSTIQVMTADRREYSNKVMSGPPPPPSQPSYNDME
FGGNPYGDAYYPGDNSFYGGGGGAFDNPQPWAAGQAPPPIGQNNWDGPGSVPPPTVTPVS
SAPGYFEEESMSAPPPPPEPEEERHRSRRSHRSRSRSPSRHRHSGRHRSRSRSPSHRHKR
KKSKRERDTD
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtacaagacgatgaccagtggctgtatggcgacgataaggacgagagcagg
gaggaggagggcgagctgaatgaaaagggtgatgagaaggagaaaacagccgaggaaaat
ggcaaagaagattcagctgcagaaggaagtggagaaggacaagatgctgggaaggataaa
gatgaagatatggataaagacaaagataaagatggagaggatagagaagataaagacaag
gatggaacaaatgatgatgctgagaaaggtgatgatgacagcagcgatgaagatgacgtg
accatcactattggggccttgaagacccagccagatatcattcaggctcccacagcatct
caccctgtacgcttccagcacaagacagcaccaagtgctggcctgaaggatgaagacttc
acttcaccggggaaagtgaatggtgtacccatcacagaattcagtatggcagagctggag
gagaagccttggagaaaaccgggtgcagacatctctgactacttcaactatgggtttaat
gaagagacctggttcaggtactgtgaacgtcaaaaacggatgagaatcaacgaatctgga
gcaggcttggctggacttggcatcagcataacaaagccatttggcaatactccaaacacc
atccctgtgactattgtgaatgacaatagcaagtatgggggatctggctctcagcgtccc
aaggcaggacctccaccacgcaacaaaggcatgggacagattgatgtcataggaggagct
tctaatccaaacaaaaccagcactattcaggtgatgacagctgacaggcgggaatattcc
aacaaggtgatgagtggcccgcccccacccccctcccaaccttcttacaatgacatggag
tttggtggcaatccatatggagatgcttactatcctggcgacaattcattttacggcggt
ggtggtggtgcttttgacaatccacaaccctgggctgcagggcaggcacctcctccaata
ggtcagaacaactgggatgggccaggatctgttcctcctccaactgtaactccagtgtct
agtgccccaggctactttgaagaggagtccatgagtgctccgccaccaccacctgagccg
gaggaggaaaggcacagatctcggcgaagtcatcgatcccgcagccgctcacccagtcgt
cacagacactcaggaagacaccgctctcgctcccgttcaccatcccatcgacacaaacgc
aagaagtccaagagagaacgggatacagactga
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