Portunus trituberculatus (swimming crab): 123515390
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Entry
123515390 CDS
T07853
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123515390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123515390
03036 Chromosome and associated proteins [BR:
ptru03036
]
123515390
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123515390
Coactivators
SAGA/TFTC/STAGA complex
123515390
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123515390
STAGA complex
123515390
TFTC complex
123515390
SAGA complex
123515390
SLIK complex
123515390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
123515390
NCBI-ProteinID:
XP_045129853
LinkDB
All DBs
Position
39:12766719..12774991
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AA seq
590 aa
AA seq
DB search
MGDRNDNRGDEKRCAQVAVESIITWGEAAGVADLPQDLARVIAADVTYRLRQTLSVCGQF
LRHSKRRRLTPDDINRALVWMDVPSVNGYTSSDPVEWQAVPEVGVHIPHDPIVNLASTGL
SGDIFHQPGSPCVRGEWAYITGHTIVKGEGGGDPIPAPLPLAADHLQYYKTLFSVITGPS
NDLFKLMCEDVASSPGVNGIVGYIVGGVMRGAHRARQKPCILRRLLLIVQALLLNPNLHL
GPQNYMRDIINVLVYCIIIERKSPQDTQMIRSLACNVLLQVVSREPGCRVTWEGVVSSLG
GVVASSSRPWGQHVGALIGLLTLGCPALLHSLTPIARSYHNRLAHAIAQAPSPSTRDALD
AHTAKCLLLGGLVNVMKSYVKSLPDNMVMFSSTKESTSPPASSMSSSGMGEGDVPFEQVQ
EIYNLGEEAYGSAFIAQVPTVYLCCTPNHVPSFLQSSVYRDQAISGDALLNPPPAKRPNY
KSSSSHHLHQTLSRAKVRRRDQSYAPAQVFEGYRSLPEKFIQVNIGGCPTKSFNKLKRRE
SSLPTVVPHPHRPLLARYCTRLTGCMPHNTFTKPLHPPLRPGPSLQYLIL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagaaatgataacagaggtgatgagaagcgatgtgctcaagtggctgtggag
agcatcatcacttggggggaggcagcaggtgtggcagaccttccacaagacctggcccgt
gtcattgctgcagatgtcacctacagacttcgacagaccctcagtgtgtgtggacagttt
ctgagacacagcaagaggcgcagactaaccccagatgacatcaatcgagcgcttgtgtgg
atggatgtcccttctgtcaatgggtacacaagcagtgacccagtggagtggcaagcagtg
cctgaggtgggggtgcacatcccacatgatcccatagtcaacctagccagcacaggcctc
agtggagacatatttcaccagcctggcagcccttgcgtcagaggagagtgggcgtacatc
acagggcacaccatagtgaaaggagagggtggtggagaccccataccagcccccttgccc
ttagcagcagaccatcttcagtattataagacgctgttcagtgttatcactgggccatca
aatgaccttttcaaattgatgtgtgaagatgtggcatctagccctggtgtgaatggcatt
gtgggttacatagtgggtggcgtgatgcgaggagctcaccgggcaagacagaagccatgc
atccttcgtcgcctgctcctcattgtacaagcacttctcctcaacccgaacctccacctg
ggtcctcagaactatatgcgtgacatcatcaacgtgcttgtgtattgcatcattattgaa
cgcaagtctcctcaagacactcagatgatccgcagcttggcttgcaatgtgctgcttcag
gtggtgtcacgagagcctgggtgtcgggtaacctgggagggagtggtgagtagtctggga
ggggtggtggccagtagcagcaggccgtggggacaacatgtaggggcactcattgggctc
ctcaccctgggatgtcctgctctgctacacagcctcactcccattgcccgttcatatcac
aaccgtctggcccacgccattgcccaggcaccaagccccagcactcgtgatgccctggat
gcccacacagccaagtgcctcttgctgggtgggctcgtcaatgtcatgaaaagctacgtt
aagagtctcccagacaatatggtaatgttttcctctacaaaggagtctacatcacctcca
gcatcctccatgtcatccagtggcatgggagaaggtgacgtgccctttgaacaagtacag
gagatctacaaccttggggaggaggcatatggatcagcttttatagctcaggtgcctact
gtgtacttgtgctgcactcccaatcatgttcctagcttcttgcagtcttctgtttacaga
gaccaagccatctctggggacgctcttctcaaccctccacccgccaagcgacccaattat
aaatcctcatcctcacaccacctgcaccagacactaagcagagccaaggtaagaagaaga
gaccagtcctatgcaccagcacaggtgtttgagggatacaggagtctccctgaaaaattt
atccaggtgaatatcggaggatgtccgacaaagagtttcaacaaacttaagaggagagaa
agttctttgcccacagttgtgccacacccacaccgacccctccttgcacggtattgtaca
aggctcactggttgtatgccccacaacaccttcaccaaacctctgcatcctccactaaga
cctggaccttcattacagtacctaatcctgtaa
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