Portunus trituberculatus (swimming crab): 123515521
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Entry
123515521 CDS
T07853
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123515521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123515521
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
123515521
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GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
123515521
NCBI-ProteinID:
XP_045130154
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Position
39:2930819..2944784
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AA seq
228 aa
AA seq
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MAAQKRGAGPTGWPKNSTPPSYGAKYNGNPSMALNRTISLYPLTNYTFGTKDALYERDPS
VPARFQRMREEFDKIGMRRSVEAVLLVHEHGLPHVLLLQLGTTFFKLPGGELDTEEDEVE
GLKRLLTETLGRQDGVKQEWVIEDIIGNWWRPNFEPPQYPYIPSHITKPKEHKKLFLVQL
GEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCRFNFTYM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacagaagcggggagctggacccacgggctggccaaaaaactccacgccaccc
tcctacggcgccaagtacaacggaaatccatccatggctctcaacagaactatcagtttg
tacccactcacaaactacacatttggaaccaaggatgcactgtatgagagagaccccagt
gtgccagcaaggttccagcgaatgcgtgaagaatttgacaagattggaatgaggcggagt
gttgaggcagtgctgctggttcacgaacatggactgccacacgtcctgctgctgcaactt
ggcacaacattctttaaactgccgggtggagagctggacacagaagaggatgaagtggag
ggcctcaagcgactactgacagagacccttgggcggcaggatggggtcaagcaggagtgg
gtcattgaagatataatagggaactggtggagaccaaactttgagcctccacaataccct
tatattccctcacacatcaccaaacccaaggaacataaaaagctcttcttagtccaactt
ggagaaaaggccctgtttgcagtaccaaaaaattataagcttgtcgctgcacctttattt
gaactttatgacaattcacaaggatatggaccaattatatcatctctaccacaagctctt
tgcagattcaattttacttatatgtaa
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