KEGG   Portunus trituberculatus (swimming crab): 123517113
Entry
123517113         CDS       T07853                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
ptru  Portunus trituberculatus (swimming crab)
Pathway
ptru03013  Nucleocytoplasmic transport
ptru04141  Protein processing in endoplasmic reticulum
ptru04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123517113
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123517113
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    123517113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptru03019]
    123517113
   04131 Membrane trafficking [BR:ptru04131]
    123517113
Messenger RNA biogenesis [BR:ptru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123517113
Membrane trafficking [BR:ptru04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    123517113
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    123517113
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    123517113
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_RIG_2nd WDR55 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_WDR36-Utp21_1st Rax2 NBCH_WD40
Other DBs
NCBI-GeneID: 123517113
NCBI-ProteinID: XP_045132962
LinkDB
Position
6:358762..385386
AA seq 313 aa
MVSVISNVETGHDDMIHDAQMDFFGTRLATCSSDRSVKIFEVKGSTHTLVANLREHEGPV
WQVAWAHPMFGNILASCSYDRKVIIWQEDGHKWKKIHEHANHDSSVNSVCWAPHEHGLVL
ACASADGSVSILTSTAHTWEFKKITNAHSIGCNSVSWAPAVASGSADGSGRTGAIPVQRI
VTGGCDTYVKIWRLDGTSGDWVEENKMEGHSDWVRDVAWAPSIGLPRSIIASCSQDRRVI
IWVNDGVTGVWQPRELNTFDDVIWHVSWSVTGNILAVSGGDNKVSLWKENLDGQWVCLSD
SAKSQPTSEQRTL
NT seq 942 nt   +upstreamnt  +downstreamnt
atggtttccgtgatcagcaatgtggagacgggccacgatgatatgatccacgatgcccag
atggacttttttggcacccgtcttgccacctgctcctcagaccgctccgtcaagatcttt
gaggtgaaggggtccacacacaccctagtggccaacctcagagaacacgagggaccggtg
tggcaggtggcgtgggcgcacccaatgttcggcaacatcctggcgtcctgcagctacgac
cgcaaagtgatcatttggcaggaggacggacacaagtggaagaagatacatgaacacgcc
aaccacgactcatcagtgaacagcgtgtgttgggcgccacatgagcacggcctggtgttg
gcgtgtgcctcggcggatggctcagtgtccatcctcacctccactgctcacacctgggag
tttaagaagatcaccaacgctcattcgattggctgtaactccgtcagctgggcgcctgct
gtggcctcagggtcagcggacggctcagggcggacgggggcaataccagtccagcgcatt
gtgacaggcgggtgcgacacttatgtaaaaatctggcgtctggatggcacgagtggagac
tgggtggaggagaacaagatggagggacattctgattgggtgagagatgtggcctgggct
ccctccatcggcctgcctcgctccatcattgcctcatgctctcaggaccggcgcgtgatc
atctgggtgaacgacggggtgaccggtgtgtggcaaccccgagaattgaacaccttcgat
gacgtcatttggcatgtcagctggtccgtcactggcaacattctggctgtgtccggcggg
gataacaaggtgagcttgtggaaggagaacctggatgggcagtgggtgtgtctgagtgac
tccgccaagagccagccaacctccgaacagcgcaccttataa

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