Portunus trituberculatus (swimming crab): 123517345
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Entry
123517345 CDS
T07853
Name
(RefSeq) poly(A) polymerase beta-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123517345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123517345
Enzymes [BR:
ptru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
123517345
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
123517345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
123517345
NCBI-ProteinID:
XP_045133279
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All DBs
Position
42:12725174..12815725
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AA seq
885 aa
AA seq
DB search
MDASRTLGMTSAISLAKPKASDLEHTRELSEYLKEAGMFEEDSELNHRFEVLGKLNTLVR
TWIRDISINVKNMPPQIADTVGGKICTFGSYRLGVAGKGADIDALCVAPRHIERTDYFSS
FYELLKEQPEVTEMRAVEEAYVPVIKMKYEGIEIDLLFARLALKEVPDSVDLKDDTILKN
LDEKCVRSLNGCRVTDEILRQVPNRESFRLALRAVKLWAKRHGVYSNVLGYLGGVSWAML
VARTCQLYPNATASTLVEKFFLVFSKWTWPAPVYLKQPYDAKLGFKVWDPRVNVQDRFHL
MPIITPAYPQQNSTFNTSQSTRAVMVEEFKSGLQITEDIMLGKATWDKLFQPPNFFMKYR
HYLVVIAVARTPEDHLEWYGLVESKIRHLILSLEHNTAIKTVHINPATFSCRVEEYLGKP
HSSWFLGVDFNKSENVNIDLTNDINIFVEVVYKQSTYNKAYKDGMEVNCKYVKRKQLTNY
LSLEDLEKYKPKTENQPRHIGQKRKSDPIAPDSPSRESPEPTKKAKIDSDLPQASLNGDD
SNTSIDEAYSNSSLPGLTPEINASQMTCQDSASPAHSPNTLVPEMLPYLHQHPALPHHLY
FLQSDSSSHLPSSYHDQSTFQHDQHVNPPEFQYHRQDFHDHQLQNFNENSKNALLFQVQC
YPTFPTSQNHSPNNAMNNVQMVRMPLDSSPLNVAHQENNDFSSPIIQLQTFHMPQFPQNM
TSHPPPVAFSMPYPNSQQNSHDKSCSTPPSYGSTSIPPASSFLSPCSNFHCSTPLSVAMH
QNRIPFQQPRSYHPSNSHNNSNTASSQFSHNINHNHHHHHSASQPQRQSQQSSSTTCLSF
SRRVVKPSQLDLARQRLSSVELPDVLTPEPPQLAPSSGSFAIHFK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagtagaactttaggcatgacatcggccattagcttggccaagccaaaagcc
tctgacctagagcataccagggagctgtctgaataccttaaggaggctggcatgtttgag
gaagattctgagctcaatcacaggtttgaggtgctgggaaagctgaatacattagtaagg
acttggattcgagatatcagcataaatgtcaagaacatgccaccacagattgctgacact
gttggaggtaagatctgcacttttggttcctaccgtctgggagtggctggcaagggtgct
gacattgatgccttgtgtgtggctccaagacatatagagcgcacagattatttctccagt
ttttatgaacttctcaaagaacagccggaagtcacagaaatgagggctgtggaagaggca
tatgttcctgtcatcaaaatgaaatatgaaggcattgaaattgatcttttgtttgcccgg
ttagctcttaaggaagtcccggactctgttgatcttaaagatgatacaattctcaagaac
ttagatgaaaagtgtgtacgcagtcttaatggttgccgagtaaccgatgaaattcttcgg
caagttcccaacagagaaagctttcgcttggctctcagggctgttaaactatgggcaaaa
cgtcatggtgtatacagcaatgttcttggttatcttggaggtgtgtcatgggccatgctg
gtggctagaacttgtcaactttacccaaatgctacagcttccactttagttgaaaaattt
tttcttgtcttctctaagtggacttggccggcaccagtatacctgaagcaaccatatgat
gcaaaactcgggtttaaggtttgggatccgcgggtgaatgttcaagacaggtttcatttg
atgccaatcataacaccagcatatccccagcaaaattccaccttcaatacttcacagtcc
acccgagcagtgatggtagaggaattcaaatcaggcctacagatcactgaggacatcatg
ctggggaaagccacatgggacaaactctttcaacctccaaatttctttatgaaatacaga
cattatctggtggtgattgctgtagctcgcacaccagaagaccaccttgagtggtatggt
ctggttgagtccaaaatcagacacttgatcttaagcttggagcacaacacagcaataaag
acagttcacatcaaccctgcaacttttagttgtcgggtagaagaatacttgggaaaaccc
cattcttcttggttcttgggggtagattttaacaaatcagaaaacgtgaacattgactta
accaatgatataaatatatttgttgaagtagtgtacaaacagagcacctacaacaaggct
tacaaggatggaatggaagtaaattgcaagtatgttaagcggaaacagctaacaaactac
ctatccttggaagacctagaaaaatataaacctaagacagaaaatcagccacgtcacata
ggacaaaagaggaagtcagatcccatagcaccagactctcccagcagagaaagtccagag
cctacaaagaaagctaaaattgactctgatctacctcaggcgagtttgaatggcgatgac
tctaacacctccatagatgaagcatactccaattcatccttacctggactaactccagaa
ataaatgctagccagatgacctgccaagactccgcttccccagcacactctccaaacaca
ttagttcctgagatgttgccttatctacaccagcatcctgctctgccacatcacctgtat
tttctccaaagtgattccagctctcatttgccttcatcataccatgatcagtcaactttt
cagcatgatcagcatgttaatccccctgaatttcagtatcataggcaagactttcatgat
catcagttgcaaaattttaatgaaaattcaaagaatgctttattgtttcaagttcagtgt
tatccaacatttcccacatctcagaatcactccccaaataatgcaatgaataatgtccaa
atggtcagaatgcctctagattcctctccattaaatgtagcacatcaggaaaataatgat
ttttctagtcccatcattcaacttcagacattccacatgcctcagtttcctcaaaatatg
acaagccatcctcctcctgtagctttctctatgccataccctaatagtcaacaaaattca
catgataaatcttgttccactccaccatcctatggaagcacaagtatcccacctgcttca
tcctttttgagcccttgctctaattttcactgctcaactccactttctgttgctatgcac
caaaacagaatcccttttcaacaacctagatcataccatccatccaattcacataacaat
tccaatacagcttcttcacaattcagtcataacattaaccacaaccaccatcatcatcac
agtgcaagccaacctcaaagacaaagccaacaaagctccagcaccacctgcttgtcattt
tcaaggcgagtggtgaagccatctcagctggatttggcaaggcagcggctatcaagtgtt
gaacttcctgatgtcctcactcctgagccacctcaactggctccttcatctggcagtttt
gcaattcacttcaaatag
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