Portunus trituberculatus (swimming crab): 123517481
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Entry
123517481 CDS
T07853
Name
(RefSeq) N-glycosylase/DNA lyase-like isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
123517481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123517481
Enzymes [BR:
ptru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
123517481
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
123517481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
NOMO1-like_2nd
Motif
Other DBs
NCBI-GeneID:
123517481
NCBI-ProteinID:
XP_045133510
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Position
42:complement(2624719..2630954)
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AA seq
433 aa
AA seq
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MVNASPTPAPRHLRLQRTVNSRLLHVPNEVGKDCSVNLILPLTHAVVDYCAYLGGNITKG
CIAIITSFFNHNEVKFYAVGRGRMTSAKMFSLLCPKKELQLHVTLQCGQSFRWKEISPGK
WRGVIGHKVWTLTQDESHIHYNIYPETSNNEACTNPKPKQKTKRTNKIDVGQEKLEAVLK
DYFQLDFSLEKLYGDWKKADLNFRSVCHEFTGVRMLNQDPVENVFSFICSSNNNIKRISM
LVERLCLLYGAKIGNLDGTTWHSFPTVSSLAADGVEETLRAQGFGYRAKFIHKSAQMIME
RGGEAWLYSLRSLSYEDCHAQLMTLHGIGAKVSDCICLMSMGHLSAIPVDTHVFQIAARD
YLPHLRSCKTLTQKVYCEIGDHFRKVFGEYAGWAHSVLFSADLKRFENMKSQDNHPSKDK
HAKRQKTKHSCTK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacgcctccccgacacccgccccccgtcatcttcgcctccaaaggacagtaaat
tctcgtctgttacacgttcctaatgaagttgggaaggactgttccgtaaacttaattctt
cccttgactcacgctgtggtagactactgtgcataccttggaggaaatatcacaaaaggg
tgtattgccatcattacgagtttctttaatcacaatgaagtaaagttttatgctgtgggt
agaggcagaatgacatctgcaaagatgttttccctgctgtgtccaaaaaaagagcttcag
cttcatgtaactctccagtgtggccagtcattccggtggaaagaaatcagcccagggaag
tggcgaggagtcatagggcacaaggtgtggaccctcacccaagatgaatctcatatacat
tacaacatttacccagagacaagtaataatgaagcatgtaccaaccccaaaccaaaacag
aaaacaaagaggacaaataaaatagatgttggacaagagaaactggaagctgtacttaaa
gattattttcaattagatttttcccttgaaaagctgtatggtgactggaaaaaggcagat
ttgaattttagatcggtgtgccacgaatttacaggtgttcgcatgctgaatcaagaccca
gttgaaaatgtcttttcatttatttgttcttcaaacaataacatcaaaagaatttccatg
cttgtggagcgattatgtctgctgtatggcgctaagattggcaaccttgatggcactacc
tggcattcttttcccacagtatcttcactggcagctgatggggtggaagagacacttcgg
gcacaaggctttggttacagagccaaattcatccacaaatctgctcagatgataatggag
agagggggtgaggcttggctttactccctgagatcattgtcatatgaagattgtcatgct
cagttgatgaccctccatggtattggtgcaaaagtgagtgactgtatctgcctgatgtcc
atgggccacctgagtgccatcccggtagatacacatgtgttccagatcgcagcaagggac
tacttgcctcatctacgttcctgcaagaccctcacacagaaagtgtattgtgaaataggc
gaccattttcgcaaggtgtttggtgaatatgctggatgggcacattctgtcttgtttagt
gcagatttgaagagatttgaaaacatgaagtctcaagacaatcatccatcaaaagataag
catgcaaaaaggcagaaaaccaaacacagttgtacaaaatag
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