Portunus trituberculatus (swimming crab): 123517568
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Entry
123517568 CDS
T07853
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123517568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123517568
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123517568
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123517568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
123517568
NCBI-ProteinID:
XP_045133732
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All DBs
Position
42:27525739..27539492
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AA seq
473 aa
AA seq
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MDRRGYNTRYPRPPLVGRGAASVSHSAGNPRAGGGVRPGGGETLGSMGSLGGTVARSIES
RGIVSGPSVGNLVNSGGGSSGGHSLAALSSAVAATHNTNSLFMANSIQATAATQQRAVVN
EMLRHMQGLGNRGLSQFVGRPYGSGGGNSMMGLHSNFGGDSAPPPLDLSEFPSLSSRNTD
NSQPNPMAGRQPYVGMVKQPTPETSEFTMSSEDFPALPGSQANPTGKIFAPFSDDGFSNN
EKKSNSTSGTDTPSDLVLRAAEKNQSQKRGIQTSPDGKVTNIPGGMVTDQFGMVGLLTFI
RAAETDHNLVSLALGSDLTTLGLNLNSPENLYPNFAGPWAETPCRPQDIDYHVPQEYLTN
QQIRGKLAPVKFDRYGEDLLFYMFYSNAGDVLQILAAAELYNRDWRYHKEERVWITRAPG
MAPVDKGPNYERGTYFYFDAQNWRKVPKEFHLEYDKLEERPHIPTHTPTSSAL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtagaggttataatacccggtacccgaggcccccattggtgggacgtggcgct
gcatcagtatctcactcagctggcaacccaagggctggtggtggtgtgaggcctggagga
ggagaaacgttaggtagtatggggagtttaggcggcactgttgctagaagcatcgagagt
cgcggtattgtgagtggccccagcgttggtaacctggtcaatagtggtggcggcagctca
ggtgggcacagcttggcagcgctgtcctcagcagtggcagcaacacacaacaccaattct
ttatttatggcaaacagcattcaggcgacggcggcgacgcagcagcgggctgttgtcaat
gaaatgctgcggcatatgcaaggtcttgggaaccgaggcttgagtcaatttgttggccgg
ccttatggaagtggaggaggtaatagtatgatggggcttcatagcaattttggaggtgac
tctgctcctcccccattagacctctcagaatttccctcactctcttcaagaaacaccgat
aattctcagccaaacccaatggctggcagacaaccgtatgtgggcatggttaagcaaccc
accccagaaacctctgagttcaccatgagcagcgaagacttcccagcgttacctggctca
caggcgaaccccactggtaaaatcttcgcaccattttcagatgatggcttctccaataac
gaaaagaagtctaattctacatcgggtactgacactccatctgacctggtgctgagggcg
gcggaaaagaaccagtcacaaaaaagaggaatccagacttctcctgatggtaaggtaacc
aacattcctggagggatggtgactgatcagtttggcatggtgggtcttctaactttcatc
agagcggcagaaaccgaccacaatttggtctccttggcattaggttctgatctaacgact
ttaggtcttaacttgaattcaccggaaaacctttacccaaactttgctgggccttgggct
gagactccctgcagaccgcaagacattgactatcatgtaccccaggaatacctcaccaat
cagcaaataagagggaagctagcaccagtcaagtttgacagatatggtgaagatctattg
ttctatatgttctactcaaacgcaggagatgtgctacaaattcttgctgctgcagaactg
tacaacagggactggaggtaccacaaggaggagagagtgtggataaccagagcacctgga
atggccccagtagacaagggccctaactacgagagaggaacctatttctattttgatgcc
cagaattggcgaaaggttcccaaagagttccaccttgagtacgataagttggaggagagg
ccccacatccccacgcacaccccaacttcatctgccctgtga
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