Portunus trituberculatus (swimming crab): 123517967
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Entry
123517967 CDS
T07853
Name
(RefSeq) nibrin-like isoform X1
KO
K10867
nibrin
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123517967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptru03032
]
123517967
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123517967
DNA replication proteins [BR:
ptru03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123517967
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123517967
BRCA1-C complex
123517967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIBRIN_BRCT_II
FHA
RTT107_BRCT_5
Yop-YscD_cpl
Nbs1_C
Motif
Other DBs
NCBI-GeneID:
123517967
NCBI-ProteinID:
XP_045134400
LinkDB
All DBs
Position
43:15307618..15348153
Genome browser
AA seq
842 aa
AA seq
DB search
MVCNNRVYSLLMSHFSYHMCRKWVGSGLGTLLHSSPEGEHTDTAVCCYVYISQGKVHYLV
CEQELVIGRREGHILLTKDNSISRRHASIKLTFPHVNVKTREPAKVEMRDLKSTYGIFVN
DNIEKGERLPSGSTQELHHGDRIRFGMFDNIWRLEHQDLTVTTSTLRSAGLQQLTNALVI
LGGHLQENWSSDSCYLVMPTITLTVKVACALAAGRSIVLPEFFTKLVDAIINKAPHPNPA
EFLPSVEDTSVSSAGGSFVPDPNRSTIFAGLTFLFPTEALMIKMCSPVQLAGGKVELLTE
DNHEKVVSGKFILIRMKTLMPNTLYSKTLDLLKKHGLRAVPESDIGLAIVFVSTKSHCNS
AYLGPTSFFRRSSSTQSLEKPKIFATETQSTEFSVSLTGPKVVPDSGEQQPSTSAQSEMA
PPKVPIKRPLTTSDSDGVNVKRRNRASSPDLTEPLSSMDLCDKNTEVDDIKMEVTEKTFN
PEHTSTQRDYPAPSTSLDPSTSVSFAPYTLPSLKTLENEEEEETEPFQGNRHQEDLLHGE
ERVAVMRKEEPRVKPNYRNDLKFDEWWKGDKEDDDAGRKRTRCEETSPQAQENKKSKTDS
FSNKNSLSTHTDCDDSNRVNSINKRKAADNDGDIFALPRRARQRERTVENLTPKETADTE
LFDLPARTQRARRLLSNQDSSLIPPTLPSPIQETPDIAPTPTPESKTIVTTVKEGLSSSK
FIDREETDIVKDTDNTGELTMSRTLVIVKPMVKVQPIVLQTPSVKSEDSSNLPNFKIFKK
VTAASILKVIGGSDFVENDQIAASQEYKIDLEHRKNNEANIDKVPSFDEELFNLDGLKRK
RR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtaataatagagtatattctttgctaatgagtcacttcagctaccatatgtgt
agaaaatgggtcggtagtggacttgggaccctgcttcattcctcacctgagggtgagcac
acagacactgcagtctgctgctatgtgtacattagtcaaggcaaggtacactatttggtg
tgtgagcaggaactagtgattggacgacgagaaggccacatcctgctgaccaaagacaat
tccatcagtcggaggcatgcttccatcaaactcacattcccacatgttaacgtaaaaaca
agggagccagctaaggtggagatgagggatttaaagtccacgtacggcatctttgtcaat
gacaatatagagaagggtgagcggcttccctcaggtagtacccaggagctgcaccatgga
gaccgaatcagatttgggatgtttgacaacatatggaggcttgaacaccaggatctgact
gtaactacatccaccttgaggagtgcaggtctgcaacagttgaccaatgctttggttatc
ttaggaggtcacttacaggagaactggtcctcagactcctgttatttagtcatgccaact
attaccctcactgtcaaggtagcatgtgccctagcagcaggtcgcagcattgtcctccct
gaattcttcaccaagcttgttgatgcaataatcaataaagcaccacatcccaatcctgct
gaatttctaccatcagtggaggacacctcagtcagcagtgcaggcggatcctttgtccct
gacccaaatcgctctactatctttgctggcctcaccttccttttcccaactgaagctctg
atgatcaagatgtgcagtcctgttcaattagcaggtggaaaggtagagctactcacagaa
gacaaccatgaaaaagttgtgtctggtaaatttattttgatccgtatgaagactctgatg
ccaaataccctctacagcaaaactcttgacctcctgaagaaacatggtcttcgtgcagta
ccagaatcagacattgggttagctattgtctttgtaagcacaaagagccactgcaactct
gcctacctcgggcctactagttttttcagaaggtcctcaagcacacagtccttagagaaa
cccaaaatttttgctacagaaacccaatcaacagaattttcagttagtctgacaggacca
aaagttgtacctgatagtggtgaacagcaaccatctacttctgcccagagtgaaatggca
cctcccaaagtgcccatcaagagaccacttacaactagtgacagtgatggagtcaatgtc
aagcgcaggaacagagcatcctctcctgacctcacagagcctctttcttccatggatttg
tgtgataagaatactgaagttgatgatataaagatggaggtaactgagaagacattcaat
cctgaacacaccagcactcaaagagattatccagctccttccacaagtttagatccttct
acctcagtttcctttgcaccttacacacttccaagcttaaagacattagaaaatgaagag
gaggaagagactgagcctttccaaggtaacagacatcaggaagacttgctacatggagag
gaaagagttgcagtgatgagaaaggaagaaccaagagtaaagcctaattacagaaatgat
ttgaagtttgatgagtggtggaaaggggataaagaggatgatgatgcagggagaaagaga
acgaggtgtgaagaaacatcacctcaggctcaggagaacaagaaaagtaagactgatagt
ttcagtaacaaaaacagtcttagtactcatactgattgtgatgacagtaatagggtcaac
agcatcaacaagaggaaggcagcagataatgatggggacatatttgcactaccgcgacgg
gcacgacagagagagagaacagtggaaaatttaacacccaaagagactgctgacacagag
ctgtttgatctccctgctcgaactcaacgtgctaggagactcctgtccaaccaagacagc
tccttgattcctccaacgctcccaagcccaatccaggaaactccagacattgcacccact
cccacacctgagtctaaaacaattgtgacaacagtgaaggaaggactatcatccagcaaa
tttattgacagggaagaaacggatattgtcaaggacacagacaatacaggagagctgact
atgtcccgcacattggtaatagtgaagcccatggtgaaggttcagccaatagtattacag
actccatctgttaaatctgaggattccagcaatctacctaacttcaaaatatttaagaag
gtaacagcagccagcatactgaaggtaattggagggtctgactttgtggagaatgatcag
atagcagcatcacaggaatataaaatagatctggaacacaggaagaataatgaagccaat
atagataaagtgccttcatttgatgaggagctgtttaatctagatggcctgaaaaggaaa
aggaggtaa
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