Portunus trituberculatus (swimming crab): 123518329
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Entry
123518329 CDS
T07853
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03030
DNA replication
ptru03420
Nucleotide excision repair
ptru03430
Mismatch repair
ptru03440
Homologous recombination
ptru03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123518329
03420 Nucleotide excision repair
123518329
03430 Mismatch repair
123518329
03440 Homologous recombination
123518329
03460 Fanconi anemia pathway
123518329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptru03000
]
123518329
03032 DNA replication proteins [BR:
ptru03032
]
123518329
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123518329
Transcription factors [BR:
ptru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123518329
DNA replication proteins [BR:
ptru03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123518329
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123518329
MMR (mismatch excision repair)
123518329
DSBR (double strand breaks repair)
HR (homologous recombination)
123518329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
123518329
NCBI-ProteinID:
XP_045135026
LinkDB
All DBs
Position
43:20444851..20489415
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AA seq
606 aa
AA seq
DB search
MESLSTGVIADIVNGGHPEKPVVQILTMKRIPSGSQERWRLLLSDGKWSSSFAMLATQLN
PKVDSGDITNNCIIRMDRYVCNTVQENKKVLIILDLSVTMTGAEVGKKLGSPVNYDSNKS
AAQQQEQPQQHYKAPASKVAPNMASAGGNVPRIPLAQHNVPARASCVTKTPSGGNVHPIE
SLTPYQNRWTVCARVTNKSAIRTWSNSRGEGKLFSMDLLDETGEIRATAFNNEVDKFYDM
IEIDKVYFISSATLKTANKQYSNLNNDYEMSFNRTTEVTPCHEETAIPTMQFNFTSLDQL
ESLTKDTILDVIGVCKETYDLSHVVMKSTGKELTKRDIQIVDQTLREVRLTLWGTQAEIF
DGSQQPVVAVKGVKLSDFNGRSLSVLGSSCVQINPDIQEAHLLKGWFDNGGSTKETVNLS
GRSGQAGNMGGTFKLFVEAKQNTGTDQPEYCCIKGCVVMVRKESGMYQACPKEGCNKKVV
DQGNQTYRCEKCDYTHDTFQWRIMLQVCVADISDSQWVSVFQDQAEQMLNVNASELGALK
DTNKDEYDKIMDSILFKNFNLKLRCKIEVYNGESKWKATVMNLSAVDPREHSRRLITEIK
QLTGKA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggaatcccttagcacgggagtaattgctgatattgtgaatggaggacatccagaaaaa
cctgttgtccagattttgacaatgaaacggatccccagtggttctcaagagcggtggcgt
ctgctcctttctgatgggaagtggtccagcagttttgccatgttggccacccaactcaac
ccaaaagtagattcgggtgacatcacaaacaactgcattatccgtatggatagatatgtg
tgcaacactgtgcaggagaataagaaggttttgattattcttgatctcagtgtaacaatg
acaggtgcagaagttggaaagaaactagggtctcctgtcaactatgattccaataagagt
gcagcccagcaacaggaacaaccgcagcaacactacaaagctccagcatccaaagttgca
ccaaatatggcatctgcaggtggaaatgtaccgcgcattcctcttgcccaacataatgta
cctgctcgggcatcatgtgtgacaaagactccatctggtggcaatgttcatcctattgaa
tccctcaccccataccaaaatcggtggacagtctgtgctcgtgtcaccaataagtctgcc
atccgtacgtggtctaactcaaggggagaaggaaagctcttttcaatggatcttctagat
gagactggagagattcgggccactgccttcaataatgaagtagacaaattttatgatatg
atagagattgataaagtgtacttcatctcgtctgccaccctcaagaccgcgaataaacag
tatagcaacctcaacaatgattatgaaatgtcattcaatagaacaacagaagttacacca
tgtcatgaagaaaccgctatcccaacaatgcagttcaactttacatccttagatcagctg
gaatctctgacaaaggataccatcttggatgttattggggtttgtaaggagacatatgat
ctgtctcatgttgtcatgaaatcaacaggcaaggagctaactaaaagagatattcaaata
gttgatcaaactttacgagaggttcggcttacattatggggaactcaagcagagatattt
gatggatcacagcaaccggttgtggcagtgaaaggagtcaagctgtcagacttcaatggc
cgctctctgtcagttcttggttcatcctgtgtacagataaatcctgatattcaagaggct
catttgttgaagggatggtttgataatggtggtagcacaaaagagactgtcaatctttca
ggaagaagtggtcaagctggcaatatgggtggcaccttcaagctgttcgttgaagctaag
cagaacaccggaactgaccaaccagaatactgttgtatcaagggatgtgttgtgatggtt
agaaaagaatctggcatgtaccaggcctgccctaaagaaggatgcaataagaaggttgtg
gatcagggaaatcaaacatacagatgtgagaaatgtgactatacacatgacacatttcag
tggcgtatcatgcttcaagtatgtgtggctgacatttcagacagccagtgggttagcgtt
tttcaggatcaggcagaacaaatgcttaatgtaaatgcaagtgagctgggtgccttgaaa
gacacaaacaaagatgaatatgataaaataatggacagcatcctctttaagaacttcaac
ttgaaattgaggtgcaaaatagaggtatacaatggagaaagcaaatggaaagctacagtt
atgaatctcagtgctgtggaccctcgagagcatagccggcgattgatcacggagatcaaa
cagttaactgggaaagcctga
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