Portunus trituberculatus (swimming crab): 123518534
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Entry
123518534 CDS
T07853
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03013
Nucleocytoplasmic transport
ptru03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123518534
03015 mRNA surveillance pathway
123518534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123518534
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123518534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
123518534
NCBI-ProteinID:
XP_045135279
LinkDB
All DBs
Position
6:complement(314374..328823)
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AA seq
995 aa
AA seq
DB search
MADRRRRRKLAGDEDSDGGSEASDEETNGVRKTTTGSDGGDSEYESADEEELLEEEEEDD
EEEELLQTADGVILDKDKQLDDDEDRKNPQYIPKKGTFYEHDDRTAATEEDTAKEVPKEP
PVKKEVASKKKVWKEDDRWNHDRFNEYDQAPKSREELIAVYGYDIRNEEGPPRARRRRRY
GRGPNKYTRNWEDLDAYSKPTRGGVSPGLRGRGGMRSLGGSHKTLESEEDFPALGSTQPH
LKDSVEDIVSRPESQEQHWPAPDSYRGEGEHPVKHQHQSSPHPQLPPKQHQPTPPSQQPP
QQYTQRNQGMSPPSQDQRAEGRRGRGRGGVTTGLGRGAGGRGRKNRNDERAIPGDGRQNM
RGVRGGFHQHPVRIQPVSPHYHMLQQQHQEKQQQPQQQQQQQQPQQQQQQHTPREVDDMT
MDLKNLSVSSQNRDEAFRGKNRGGGGGGGGLDSRRSNVPPRLQQDPAVAASLAGRGGRGG
NASAAADGSSSRPKRYSSQRQRSIPEQPVPPYTQQHGYLEGPVETGYQGGVSDAGIATST
NHSVTVPHTQLPLAGGAPPTFVPPAFTTSPPTYPTEPFLGSPPAPRMFPPVTQAPHLFGP
PVAPPVPVPGPPVAGPPPVAPLGAPPVGAPTVPGPPVTGPPFLPPENMINFGAHPGPLPG
AAPHPPQFPPFQGYTPGPVVSASQPGEIYSNGVTYYNTESQQQLPRANLPLQKRPKAAIP
IVPPPERERLRREAQGRQGREQGVLEVQDDSEDYPMEGESFEDAPQHQHQELHHQPEPHP
QEPQQPEPQQEQLQQPESQQQEPEPQQHQVENDQKQEHKPEQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQAKEMQQCKEVKQPDPHPVKQQEQQQQDQLKQEKAP
EKQPSEVKAAAEESTQHNEAQQQDKPQEQRKEKEEAREGASSGSSAPPEEASKGEVAAAA
ATAVGQETGGGAGEVVEAAPAEQPSASETVAAAAS
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgcaggagacggaggaaactggctggggatgaggactctgacggcggctcg
gaagcatcagacgaggagaccaatggcgtccgtaaaaccacaacgggcagtgacggagga
gatagcgagtatgagagtgcggacgaggaggagctgctggaggaggaggaggaggatgac
gaggaagaggagctccttcagacggcagatggagtgatacttgataaggacaaacagctg
gatgacgacgaggaccgcaagaaccctcagtacatccccaagaaaggaacgttttatgag
cacgacgacaggacggccgccacggaggaggacactgctaaggaagtgcccaaggaacca
ccagtgaagaaggaggtggcgtccaagaagaaggtgtggaaggaggacgaccgctggaac
catgaccgatttaacgagtatgatcaggcgcccaagtccagggaggagctgatcgcagtg
tacggctatgacatccgcaacgaggaggggccgcccagggcacgtcgccgcaggagatat
ggacgtgggccaaacaaatacactcgcaactgggaagaccttgacgcatactccaagcca
acccgcggaggagtaagtcccggtctgcgagggcggggcggcatgaggtccttaggggga
agccacaagaccctggagagcgaagaagacttccctgccctaggatccacacagcctcac
ctgaaggactctgtggaggatattgtttcccgcccagagtcgcaggagcagcactggccg
gcccctgactcctatcgtggtgagggcgaacatccagtgaagcaccaacaccagtcatca
ccacacccacagctgccacccaagcaacaccagccaacaccccccagccagcagccaccc
caacagtacacccaaaggaaccaaggcatgagtcccccgagccaggaccagcgggccgag
gggagaaggggtcggggccgaggcggggtgacaacggggctcggcaggggggctggtggc
aggggacgcaagaataggaacgatgagcgtgccatccctggtgatggtcggcagaacatg
cgcggcgttaggggcggcttccatcaacacccggtgcgcatccagcctgtcagccctcac
taccacatgctccagcagcagcaccaggagaagcagcagcagccacagcagcagcagcag
cagcagcagccacaacagcagcagcaacagcacacaccacgggaggttgacgacatgacg
atggacttgaagaacttgtctgtctcatcacagaacagagacgaagcattcaggggcaag
aacaggggaggtggtggcggtggtggcggcctagacagtcgccgcagcaacgtgccgccg
cgcctgcagcaggacccagcggtggccgccagcctggccgggcgaggcggccgtggcggc
aacgcgtcagcagcagcagacgggtcctcgtcgcgacccaagcgttactcatcgcagcgg
cagcggtccatcccggagcagcctgtgccaccctacacccaacagcacggctacctggag
ggccctgtggagacaggataccagggcggcgtgagtgacgcaggcattgcaacgtccacc
aaccacagtgtgacggtgccacacacgcagctgcccctggcagggggagcacccccaacc
tttgtgcctcctgccttcaccacgtcaccccctacctaccccacagagcccttcctgggc
agccctcccgccccccgcatgttccctccagtcactcaggcgccacacctctttggtccc
ccagtggctcccccagtgcctgttcctggacccccagtggcagggccaccccccgtcgcc
cctcttggtgccccaccagtgggtgcccccacagtgcctggccctcctgtcactggccca
cccttcctgccaccggagaacatgatcaactttggtgcccatcctggccccctccccggt
gctgccccacatccaccacagttcccccccttccagggctacacccctggcccagtggtc
agtgcgtcccagccgggtgagatctacagcaacggggtcacttactacaacacggagagt
cagcagcagctgccccgggccaacctgcccctacagaagcggcccaaggcggccatcccc
atcgtgccgccaccagagagggagcgactgcggcgggaggcccaggggaggcaggggcga
gagcagggagtcttggaggtccaggatgactctgaggactatcctatggagggagagtcc
tttgaggatgctccacagcaccaacaccaggagctgcaccaccaaccagagccacaccca
caggagccacagcagccagagccacaacaagagcagctgcagcagccagagtcacagcag
caggagccagagccacagcagcaccaggtagagaatgaccaaaagcaggaacataagcca
gagcaacagcagcagcagcagcagcaacagcaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacagcagcagcagcaacaacaacaacagcagcagcagcagcagcag
cagcagcagcagcaggccaaggagatgcaacagtgtaaagaagtgaagcagcctgaccct
catccagtgaagcaacaagaacaacaacaacaagatcaattaaaacaagagaaagcacca
gagaagcagccgagtgaagtgaaggctgctgcagaggagtccacacagcacaatgaggca
cagcagcaagacaagccacaggagcagaggaaggagaaggaggaggctagggaaggtgca
agtagtggctcctcagcaccaccagaggaggcgtctaagggcgaggtggcggcagcagcg
gcgacagcagtagggcaggagacgggtggtggggcgggggaggtggtggaggcagccccg
gcagagcagccgtctgcgtcggagacggtcgcagcggcagcgtcttaa
DBGET
integrated database retrieval system
