Portunus trituberculatus (swimming crab): 123518598
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Entry
123518598 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: putative transcription factor SPT20 homolog-like 2
KO
K21245
transcription factor SPT20 homolog
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123518598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptru03036
]
123518598
Chromosome and associated proteins [BR:
ptru03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123518598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
TFIIA
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
123518598
NCBI-ProteinID:
XP_045135431
LinkDB
All DBs
Position
6:complement(9521586..9820091)
Genome browser
AA seq
1061 aa
AA seq
DB search
MEPLEALISKADYLMEQSHEALVQGGYGALQGQPLFKKLAAIYAEEANKTPRIKSISLTH
KLLDKLVKRENLNCLVVNLYRGNEGYSLAIKMSSGLETETVRLPYEEDSFLTYIDNEKLP
PMLLDLLDDSNIEIYHSGCVIAELRDYRRMLDSSYETRYVLLQPTGQSVMADVASMSQDR
DWSTEEKLYVEAEIIKRMAPSLNLSPSPLVAIISNKLHQRKYKFSTVPVKRAARRFSQIA
QNRKKVFEEFAAPKCLRLHNFLSGKKERRSNGKNVTKPLIPTSMDSIPDLSVPESIDVPK
VARMYERPSYTTDNSLVFIEELVLETERAQGRIYHTKLTISQRKTDEVYFGELYVDRDYQ
EGKQNGSTCKFQLGTQQQVCRYIQQFKEIFTEDWRKSVKITHRVAGQAAYSTFMPGSRDK
KDVELLKQASAQQPAQQQIQGQQQTQQQQQQQQQQQQQQQQQQQQRAVADAVIAVAIATA
GGGSLGVSSTASTTGVTQHTPQNVIIVSNGDGVKKSVTVVSKPVGVTSTPTSLTSLITAQ
PGQQGSGGHQVVVARNFLAGRGTQTATGMTGMASSITGTVTTGPGATKITLPSLTTQLNR
TVPAYSQAVSLAKPQTSSPSLTAXLKGTGPASSQAAVSVPRPQVVSLVGAVSEVAGHSKT
PTSDPPSSSLNVSGLQQLLAGTPSADNPAPQRGGPSLLERLSAQSSSAVAAAAAASKQQE
GSGVKIGVSSASSGQTSVVGSAAAAVLRSDSGSGGPPPNVNIASLNLPGLNVAGLQSLTT
NIGGLQNVQVTIPGLAVPISLSLNVPVSSSTGVILSSPPPASVATKVSGSTASTTATTVM
IASQPALQQGQVVQLPISQLNSSQLATQLAKSSGQQGGSSSSIPVLQVQGVGGQLFTSVR
GSGSVTSGGAVSGTGTSATSLPQQTVQVALQTGQGNSTVVSGGEAAIGSVHTATSQPSVV
TLKAKQQLQLALQKTNSISNLTHVQQKLAALAKLTQQPQQQQQQQQQPQPQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggagcctctggaggcactcatcagcaaggcagattacttgatggagcagagccatgag
gcgctggtgcagggtggctatggggccctgcagggacagcctctctttaagaagctagct
gctatctatgctgaagaagccaacaagacaccaagaataaagagtatcagtttgacacac
aaattgttggataagttggtgaaacgagaaaatttgaactgtttggtggtgaacctgtac
cgaggcaatgaaggctattcccttgctatcaagatgtcatcaggacttgaaactgaaact
gtccgtcttccatatgaagaagattctttcctgacttacattgataatgaaaaactccct
ccaatgttgctagacttattagacgattccaacatagaaatttatcactcgggatgtgtc
atagcagagttgcgtgattacagaaggatgctggactcttcttatgagacaagatacgtt
cttcttcagccaacaggccagtcggtgatggctgatgttgcatctatgagccaagaccgg
gactggagcactgaagagaagctgtatgtagaagctgagattattaagagaatggctcct
tccctcaacctgtctccatcacccctggtggccatcatcagtaacaagctgcaccagagg
aagtacaagttttcaacagtgccagtcaaaagagcagcaaggaggtttagtcagattgct
cagaatcggaaaaaggtgtttgaggagtttgcagcgcccaagtgcctaaggttacacaat
ttcctgagtggcaagaaggaaagacgatccaatgggaagaatgtaacaaaaccactgatc
cctacatcaatggacagtatcccagatctgagtgttcctgaaagcattgacgttcccaaa
gttgctcgtatgtatgaacgtccaagctacaccacagacaactcccttgtgttcattgag
gagctggtgctggagactgagcgggcccagggcaggatataccacaccaaactgacgata
tcacaaaggaaaacagatgaggtgtactttggtgaactgtatgttgaccgggactaccaa
gaaggaaaacaaaatggatctacttgcaagtttcagttgggaacacaacagcaagtgtgt
cgatatatacaacagttcaaggaaatatttactgaagactggaggaagagtgtcaaaata
acccatagggtggctgggcaggcagcctactccactttcatgcctggcagtcgtgacaaa
aaagatgtggagcttctcaaacaagcttcagcgcagcaaccagctcagcaacagattcaa
ggacagcaacagactcaacaacagcagcaacagcaacagcaacagcaacagcagcagcag
caacaacaacaacaacgagctgttgctgacgctgttattgcggtggccattgctacagct
ggagggggctctcttggggtatcatcgactgcttctacaacaggcgtcacccaacacact
cctcagaacgtcatcatcgtctccaatggtgatggtgtgaagaaatctgttactgtggtc
agtaaaccagtaggggtgacttctacccctacttctcttaccagcctcatcacagctcaa
ccaggtcagcagggctcaggaggtcatcaggtagtggtggcacgaaactttttggcaggc
cgaggaacacagactgccacaggaatgacaggcatggccagcagcattactggtacagtg
acaacagggccaggagccaccaagataaccctgccttccttgaccacgcagctgaatcga
acagtgcctgcatactcacaggcagtctcacttgccaagccgcagacttcctcgccgtca
ttgactgctnctctgaagggcaccggaccagctagctcccaggcagcagtgtctgtgcca
aggcctcaggttgtcagtttggtaggagcagtgagtgaggtagcaggccactctaaaacc
cctaccagtgaccctccaagctcctccctcaatgtatctggactgcaacaactgttggca
ggtaccccatcagcagacaacccggcacctcagcgaggaggtccctccctcctggagcgc
ttgtcagcacaatcatcaagtgctgttgctgccgctgctgcagccagcaagcaacaagag
ggaagtggagtgaaaataggagtgagcagtgcatcatctggccagacaagtgtggtgggc
tcagctgcggcagctgttttgcggagtgacagtggtagtggaggacctcctccaaatgtg
aacattgccagcctgaaccttcctggcctaaatgtagcaggactgcagagcttgacaacg
aacattggtggcttgcaaaatgttcaagtaaccattccaggactggcagtgcccatctct
ctctccctcaatgtgcctgtgagcagctccactggggtcatcctttcttccccgccgcct
gccagtgtagccaccaaggtttctggatctacagcctctaccacagcaacaacagtgatg
atagccagccagccagcactccagcaaggccaagtggtccagcttcccataagtcagctg
aactcatctcagctggcaacacagcttgccaagtcatctggccagcaaggaggatcctct
tcttctattcctgtgttgcaggttcagggcgtgggaggacagctgtttacttctgtccgg
ggaagtggcagtgtgacaagtggaggggcagtatcaggtacaggcacctctgccacctcc
ctaccacagcagacagtgcaggtggctctacagactggtcagggtaacagcactgtggtc
tcaggaggagaggctgccattggctcagttcacactgctacttctcagccatctgtggtc
acactcaaggccaagcagcaactccagttggccctacagaagaccaactcaataagcaat
ctcacacatgtacagcagaaattggctgctcttgccaaactcacacagcagccacagcag
cagcaacagcagcagcagcagccgcagccacaacagcagcaacagcaacagcagcagcag
caacagcaacagcaacaacagcaacaacaacaacaacagcaacaacaacagcagcagcaa
caacaacagcaacagcaacaacaacagcaacaacaacaacaacaacagcagcagcaacaa
caataa
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integrated database retrieval system
