Portunus trituberculatus (swimming crab): 123518800
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Entry
123518800 CDS
T07853
Name
(RefSeq) uncharacterized protein LOC123518800 isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123518800
Enzymes [BR:
ptru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
123518800
5.6.2.5 RNA 5'-3' helicase
123518800
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123518800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
AAA_30
AAA_19
Viral_helicase1
Yop-YscD_cpl
AAA
UvrD_C_2
nSTAND3
AAA_16
AAA_22
ResIII
Motif
Other DBs
NCBI-GeneID:
123518800
NCBI-ProteinID:
XP_045135746
LinkDB
All DBs
Position
44:complement(29990595..30017963)
Genome browser
AA seq
2035 aa
AA seq
DB search
MSNYLFLKRMGREETFHLPPDKEKILIGRSPACDINFPSVYISRQHCQILRIPSGALVLK
NIKNTNCTYINELKLQNTDVSAELQVGSCIGLGVPLEYATGAGMQNKDFVFLKLESSQPA
NETWQNNARPENINAQIPPVSDASHPDDPGETATRQHDAVGSVEVSKPNSPASVACLEKL
RLHLLSFKDNWKSESVPNQGVCSTSQVGPDVSKQDEKSQMPTTANNTLHMKDKASLSEVG
LDTIRPPENKIKNIHPSEPDPRKLDNFPPPVQSIDSSLEPRQGLLEEDKSCIQADDSKMD
VASSCKNLITEAEESHSPIHIDLTQADPDSPTSKIPMETHKGSFVSLLSSDEDCIFDDLL
HMRSSLQSESKEVSGKRKRPSCVEPSSNISVTDNGEESSMKKKKRSLSLHSGMESDDESL
FWKDGGIDELLEHNKRNKDNMNKNESNKVTEGNSGDHEMAHETKSTKNSTDVLMLSDDDD
DNDLFLYKKKITDRKPDNSSQSKEKNDSESVILNTKNQKNLKRTISRTSSQESSSDNEPV
TMRKTNKTRLIIESSDSDSDFEHVPCKRNSETLQNQKLKKVSVQLTRISFKVGSPSDASG
ACFSLKGASTSKSNNKENLLGNGKNQSSETCTGKKKPSLTLKKASHSNKGEEVKTQNITK
EKRDGVQKERASDSSSSADLEKRNQLMESDKNFSKSNSGEIRKLNKQDSVEVKVEIPTDV
KIKTEPLTSCDQENNYEKHEEKRDDDFMYSQVGDEIWLSSDEEGGSLPSGGAPVSPDADI
IFMGEDEQPGFTVKEEPVEREEDCSGDVNKNDQWFSVLSQSFLEISDDEEEKDNEIYKEI
AENAGESEAKPGPSGVSEHLPDSEGEEEWWPVLSQGFFDDDEEEEDNRKENAESNSKIEL
DTRDEPRTANINNLQSVVDKLKKAPPRTSQLTEAKIPVQHHGRKSRKERSNSTEVADVYP
STSENVKQAKISKKQYKSKDAGKVRNQHKQNKNSDLRKNLTSKYNLEPYKSTLEHRTKEK
HHLVEKSETSMLPPLHSAVDKKSKVPPLDPAVNSKTLDPKSRKNISIQKKSKSADVSTED
KPRPKVVAKVTKKTRSEKLTDVDLFSFPSKTTSKQKNFKIPKSSNNGASCSSKSSKMAGS
GLVLNRKKDVEVEISKKKDVEAESSRTKDTEAETSCGRSGNLSNDTLPGVPILSTSAART
NNNPVDKIGEINRGIMKINLKKSKPKSVRFPEKEEDLVKVLLISPRKKMERTGLPCVRAS
EMLPEELKLQRQNIPPYFMELFIHHICHWNYDWLECYHHAQEKYKAGALKGIPSPPPVVE
STNCPILILYNSYNDYRETHSNLFYLELWEKIYNDWTKCRSSSNNFQALIEYVQPAFIRT
KTCVLKFWAIKLVVAIPAKQGGHNHSFRQGTLISLKIRKEGKRSIIFGYVDHVMVNRSPA
QNQVSSQMGPNLTLGVRVVKEIIQIGTVIAINDISYIRPNCRVWETLQKLPLSPLCKDIL
SPAPEAFSCDKKTEYLVKELPLNEAQRRAVTEVSSKCMFDPFVPKISLIHGPPGTGKTST
IVALITQMAMIGRKFVPVKMPRCKVLICAPSNAAVDELTLRLINLRDIGQSLRVVRVGFR
SNDHPVVRNYALDQFVNKQVQMELSSPRTESARQELLRRKILVEQVVEDLERARREQRLN
EVRQLEVRLNEMARAKAELERSFVNQPSAYEKHQLHQKWQQEFLLKAEVVATTLNSCVSG
TIGDVLTRYPNHFTCCIVDEAGQCQETETLLPLLFGIRKLVLVGDHHQLPALVLSQLAQS
KNLKKSLFERLHHRLVLELQREDVVNMLNVQYRMHPQIAEWPAYYFYQNKLRSEVTQPNT
IFNPYMMFDLQTSQEQRHQNMELYNPAEASLVCLLLEVMQPHLVGKTIGVITPYQRQKFH
LEEKLSRLKGKMNISINTIDGFQGQERDVIVLSFVRANNTASIGFLSHRQRLNVALTRAK
EVCYIIASFSSLECNREWNSLINNARKRKVVCTIRSKEENDKAFIKNAITNKASV
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactatttatttctgaagcgtatgggaagagaagaaacgtttcatctgccgcct
gacaaagagaagatactgattggtcgcagtccagcatgtgacatcaattttcccagtgtc
tatatctccagacagcattgccaaatattacgtattcccagtggtgctcttgttcttaaa
aacataaagaataccaactgcacatacataaatgaattaaagctgcaaaatacagatgtc
tcagcagagctgcaagttggttcttgcattggccttggtgtgcctcttgagtatgccaca
ggggctggcatgcaaaacaaggactttgtgttccttaaacttgagagttcacagccagca
aatgaaacatggcagaataatgcaagaccagagaacataaatgctcagataccacctgtg
tctgatgcctcacatcctgatgacccgggtgagacagctactcgtcagcatgatgctgtg
gggagtgttgaagtgtctaagccaaacagtccggcatctgtggcatgcttggagaagttg
aggctacacctactctcatttaaggataattggaagtcagagtctgtacctaatcagggt
gtctgttctacatctcaagttggaccagatgtgtcaaaacaggatgagaaatcacaaatg
cccaccactgccaataatacattgcacatgaaagataaggcttcactgagtgaagtgggg
cttgatactataagaccaccagaaaataagataaaaaatattcatccctctgaacctgat
ccaaggaaacttgataattttcctccccctgtgcaaagcattgattccagccttgaacct
aggcagggtctcttagaggaagacaaatcttgtatacaagcagatgatagtaaaatggat
gtagcttcaagttgtaaaaatttgataactgaagctgaagaatcccattctcccattcat
attgatttgacacaggcagacccagactctcccacaagtaagatcccaatggaaactcat
aaaggcagttttgtttcactcctttcatctgatgaagattgtatttttgatgacttgtta
catatgaggagttcattacaaagtgaaagcaaagaagtctctggaaaaagaaagagacca
tcatgtgtagaaccttccagtaatataagtgtgactgacaatggtgaggaaagctccatg
aagaaaaagaagaggtcattatcattacacagtggtatggaaagtgatgatgaatcccta
ttttggaaggatggtggtattgatgaattgctagagcataataaaagaaataaggataat
atgaacaaaaatgaatcaaataaagttacagagggtaatagtggtgatcatgaaatggcc
catgaaacaaaaagtaccaagaattcaactgatgtcttgatgctcagtgatgatgatgat
gataatgatttgtttttgtataagaaaaagataactgatagaaaacccgataactcaagt
caaagtaaagagaaaaatgacagtgaatcagtaatacttaacacaaaaaatcagaaaaac
ttaaaaagaactatttccagaacatcctcgcaggaaagtagcagtgataatgaaccagta
acaatgagaaaaactaacaaaactcgactcatcattgaaagttcagatagtgactcagat
tttgagcatgttccttgtaaaagaaacagtgaaactcttcaaaaccagaaacttaaaaag
gtttcagttcagttaactagaatctcatttaaggttggcagcccttcagatgcctcagga
gcttgtttctctttaaaaggtgcctctacaagtaaaagtaacaataaagagaatcttctg
ggaaatggaaagaaccagtcttccgagacgtgcaccggaaagaaaaaaccttctctcact
ttgaaaaaggcaagtcattctaacaaaggtgaagaagtaaagactcaaaacatcaccaaa
gaaaagagagatggagtgcagaaagaaagagcatcagactcttcaagttctgcagattta
gagaaaagaaatcaactgatggagagtgacaaaaatttctctaaatccaattcaggggaa
atccgaaagttaaataaacaagattcagtagaggtcaaggttgagataccaacagatgtt
aaaataaaaactgaacctttaacatcatgtgaccaggaaaataattatgaaaaacatgaa
gagaaaagagatgatgatttcatgtactctcaggtgggtgatgaaatatggctatctagt
gatgaagaaggtggttctcttccatcaggtggtgcccctgttagccctgatgcagacatc
atctttatgggtgaagatgaacaaccaggtttcactgtgaaagaggaacctgttgaaagg
gaagaagattgcagtggtgatgtaaataagaatgaccagtggttttctgttctttcacag
tcatttctggagatttctgatgatgaggaagagaaagataacgagatttataaagaaatt
gctgagaatgcaggagaatctgaagccaaacctggacccagtggagttagtgagcatttg
cctgatagtgaaggtgaagaggagtggtggccagtgctttcacagggattttttgatgat
gatgaagaggaagaagacaacaggaaagaaaatgcagagagtaacagcaaaattgagttg
gatacaagagatgaaccaaggactgctaacatcaataatcttcagtctgttgtagacaaa
ttgaagaaggcacctccccggacttcacagttgactgaagctaaaattcctgtgcaacac
catggaagaaagtctagaaaggaaaggagtaatagtacagaagtagcagatgtttatccg
tctacttcagagaatgtcaaacaggcaaagattagtaaaaaacaatacaagtctaaagat
gcaggaaaagtaagaaaccaacacaaacagaacaaaaactcagacttgaggaaaaatttg
acttcaaaatataacttggagccatataaaagtaccttagagcacaggaccaaagaaaag
catcatcttgttgagaagagtgagacatccatgttgcctcctctacattctgctgtagac
aagaaatcaaaggtgcctcctctagatcctgctgtaaatagtaaaacattagatcctaaa
tctagaaaaaatatttccatccagaagaagagtaaatctgctgacgtgagcacagaggat
aagcctcgtccaaaggtggtcgctaaagttactaaaaagacacgttctgaaaaactcacc
gatgttgatctgttttcttttccatcaaaaacaacttcaaaacagaaaaactttaagatt
ccaaagtcttccaataatggagcttcttgttcttccaagagcagtaaaatggctggaagt
ggcttggttcttaatagaaaaaaagatgtagaagtagaaatcagtaagaaaaaagatgta
gaagcagaaagcagtagaacaaaagatacagaagcagagaccagttgtggtagatctgga
aatctttcaaatgatactcttcctggagtaccaattttatccacatctgcagctcgtaca
aacaataatccagtagacaagattggtgaaattaatagaggtataatgaagattaacttg
aagaaatccaaacctaaaagtgttcgctttcctgagaaagaagaggatctagtcaaagtg
cttttgatatctccccgaaagaagatggagagaacaggtctaccatgtgtgagggcaagt
gagatgttacctgaagaactgaaacttcaaaggcaaaacattcctccctacttcatggag
ctgtttatccatcacatttgccactggaattatgattggctggaatgttaccatcatgct
caagagaaatacaaggctggtgctttaaaaggaatcccttcaccaccaccagtagttgaa
agtacaaattgcccaatacttatcctttataattcatacaatgactatagagaaacacac
agtaacctcttttatcttgagctttgggagaagatctataatgattggaccaaatgtagg
tccagtagtaacaattttcaggccctaattgagtatgtgcagccagctttcatccggacc
aaaacatgtgtattaaagttttgggccattaagttagtggttgcaattccagcaaaacaa
ggtggccataatcacagttttcgacagggaactttgatttcccttaaaattcgcaaggaa
ggtaaaaggagtattatttttggttatgttgatcatgtaatggtaaatagaagtccagca
cagaatcaggtatcttcccagatgggacctaacctcacacttggagtcagagttgtcaag
gaaataattcaaattggcacagtaattgcaatcaatgacatttcttacattcgtcctaat
tgtcgagtttgggagaccctccagaagctacctctgtctcctttgtgtaaagatattctc
tctccagctcctgaagcattctcctgtgataagaagactgaatatctggtgaaagaatta
ccacttaatgaggcacaaagaagagctgtaactgaagtaagcagcaagtgcatgtttgat
ccctttgtgccaaagataagccttatccatggtcctccaggaacgggcaagaccagcacc
attgttgctctgattactcaaatggcaatgattggaaggaagtttgtaccagtaaagatg
ccacgatgtaaggtgttgatatgtgctccatctaatgcagcagtagatgagttgactctg
agactcatcaacttgcgggatattggacagagtctgcgtgttgtgagagtggggttccgg
tcaaatgatcatcctgtggtgaggaattatgcattggatcagtttgtaaacaaacaagtt
caaatggaactgtcctctccaagaactgagtctgcaaggcaggaattgctaaggaggaaa
atcttggttgagcaagttgtagaggacctggaaagggctcggagggagcagagactaaat
gaagtacgccaattagaagttcgtctaaatgaaatggccagagcaaaagcagagctggaa
agaagctttgtaaatcagccatctgcctacgagaagcaccaactccatcagaaatggcaa
caagaattcttattgaaagctgaagttgttgccaccactctcaacagctgtgtatcagga
acaattggagatgtgcttactagatacccaaaccatttcacgtgctgcattgtagatgaa
gcaggacagtgtcaggaaactgagacattactccctcttctttttgggatcagaaagtta
gtgttagtaggtgatcaccaccagttaccagccttagtgctgtcacagctggctcaaagc
aaaaacctcaagaagtcactatttgaacgactacatcatcgcctggttctagagctgcag
cgagaggatgtggtgaacatgctcaatgtgcagtaccgcatgcacccccaaatagcagag
tggccagcctactatttctatcagaacaaacttagatctgaagtgactcagcccaacacc
attttcaatccatacatgatgtttgatctccagacttcccaggagcagaggcaccagaat
atggagctctacaacccagcagaggcatccttggtgtgtttattactggaggtgatgcaa
ccccatcttgttgggaaaaccattggggttatcacaccataccaacgccagaaattccac
ctggaagaaaaactgagcaggctgaaaggcaaaatgaatatttcaattaacacaattgat
ggcttccagggtcaagagcgagatgtgatcgtgctctcctttgtccgtgccaacaacact
gctagcattggcttcctgtctcaccggcagagactgaacgtggccttgacccgtgccaag
gaagtttgctacataattgctagtttctcctctttagaatgcaacagggagtggaattca
ctcataaataatgccagaaaacgtaaagttgtttgtactataagaagtaaagaggaaaac
gacaaagcattcataaagaatgcaataacaaataaggcaagtgtttag
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integrated database retrieval system
