KEGG   Portunus trituberculatus (swimming crab): 123519360
Entry
123519360         CDS       T07853                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ptru  Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptru03041]
    123519360
Spliceosome [BR:ptru03041]
 Complex B
  Other components
   Complex B specific factors
    123519360
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd LisH_TPL NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_NWD2_C WDR90_beta-prop_4th Ge1_WD40 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_VPS8 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F Mala_s_1-like Beta-prop_EIPR1 VPS8_N Beta-prop_BBS7 Beta-prop_IFT122_2nd Beta-prop_LRRK2 VPS11_N DUF1513 DUF7165 FlgD_ig LisH_PAC1
Other DBs
NCBI-GeneID: 123519360
NCBI-ProteinID: XP_045136555
LinkDB
Position
45:9753917..9759891
AA seq 513 aa
MSIEIESADVIRLIQQYLKENNLGRTLRALQEETSITLNTVDSVESFMADINQGHWDTVL
KAIQTLKLPDKKLIDLYEQVVLELIELRELGAAKSVLRNTDPLIMLKQTMPERYVHLENL
IARSYFDPREAYPEGVTKERRRAAIAAALAGEVSVVPPSRLLALLGQALKWQQHQGLLPP
GTQIDLFRGKAAMREQEDEKVPTQQARFIRFPQKAHVESAHFSPDGQYLVTGSFDGIIEV
WNFTTGKIRKDLKYQEKDSYMMMETAVLSLAFSRDSEMLASGSQGGQVKVWRVNTGQCLR
KVERAHSEGVTSLAFNKDNSQVMSTSFDNTLRVHGLKSGKTLKEFRGHSSFVNQATFTQD
GHNIISASSDGTVKVWSVKTTECIATFKSLAGVTSMDLPVYSVHILPKNPDHIVVCNRSN
TVTIMNMQGQTVRSLSSGKREGGDFVACVVSPRGEWIFCVGEDHVLYCFSTSTGKLERTL
NVHEQSVIGMCHHPHQNLLATYSEEGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtccatagaaatagaatcagcggatgtgatccgcttgatccagcagtacctgaaggaa
aacaatctgggccgcacgctgcgagccctgcaggaggagacgtccatcaccctcaacaca
gtggactcagtggaaagcttcatggcggacattaaccagggccactgggacactgtgttg
aaggccatccagaccctcaagctgcccgacaagaaactcattgacttatacgagcaggtt
gtccttgagctgattgagctgcgtgagcttggagcagcaaagtctgtactacgtaacact
gacccactcatcatgttgaagcagaccatgccggagagatatgtacatctggagaacctc
atcgcccgctcatactttgatccacgagaggcgtaccccgagggcgtgactaaggagcgg
cgtcgagctgccatcgctgcggccctggctggagaggtgtccgtggtgcctccttcccgt
ctcctggctctccttggtcaggccctcaagtggcagcagcaccagggtctccttccacct
ggcacgcagattgatttgttccgaggtaaggcagccatgagggagcaggaggatgaaaag
gtgccaactcagcaggcacgcttcatccgcttcccacagaaggcacacgtggagagtgcc
cacttcagccccgatggacagtacctggtgacgggcagcttcgacggcatcattgaagtg
tggaatttcacaactggcaagatccgtaaggacttgaagtaccaggagaaggattcatac
atgatgatggagacagccgtgctgagtctggcattcagccgagactctgagatgctggcc
agcggctcccagggtggccaagtcaaggtgtggcgggtcaacacaggtcagtgcctgcgc
aaggtggaaagggcacattctgaaggagtcacatcactggcattcaataaggacaacagt
caagtcatgtccacctcctttgacaacactttgagagtgcatggcttgaagtccggcaag
acactgaaggagtttaggggtcactcgtcctttgtgaaccaggccaccttcacccaggac
ggccacaacatcatcagcgcctcatcagacggcactgtgaaggtgtggtcggtgaagaca
acagagtgcattgccaccttcaagtccctggctggggtgacctccatggacctgccagta
tactcagtgcacatcctacccaagaaccctgaccatatcgttgtgtgtaacaggtccaac
actgtgaccatcatgaacatgcagggccagacggtgcgttctctatcttctggtaagcgt
gaaggtggtgactttgtggcatgtgtggtgtctccgaggggcgagtggatcttttgtgtg
ggcgaggatcatgtgctctactgcttctccacctctactggcaaactggagaggaccttg
aatgttcatgagcagtcggtgattgggatgtgccaccacccccaccagaacttgctggca
acatacagtgaggaaggtctcttgaagctgtggaaaccgtag

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