Portunus trituberculatus (swimming crab): 123519489
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Entry
123519489 CDS
T07853
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru03020
RNA polymerase
ptru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
123519489
09124 Replication and repair
03420 Nucleotide excision repair
123519489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptru03021
]
123519489
03400 DNA repair and recombination proteins [BR:
ptru03400
]
123519489
Enzymes [BR:
ptru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
123519489
Transcription machinery [BR:
ptru03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
123519489
DNA repair and recombination proteins [BR:
ptru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
123519489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
123519489
NCBI-ProteinID:
XP_045136771
LinkDB
All DBs
Position
45:complement(13181162..13200896)
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AA seq
1180 aa
AA seq
DB search
MMAYADIDEDIAYGDEDGDEISPDIWQEACWLVISSYFDEKGLVRQQLDSFDEFITMTIQ
RIVEDSQAIDLQAEAQHTGGELENPPRHLLKFEQIYLSKPTNWEKDGYNYNMMPNEARLR
NLTYSSPLYVDIVKTVIKEGEKPIEHKEEKIYIGKIPIMLRSTYCLLSGLTDRDLHEVNE
CPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKCEIRSCIEHSARPVSTLW
INMMARGGSSAKKSAIGQRIIGVLPYVKQEIPVMIVFRALGFVADRDILEHIIYDFDDPE
MMEMVKPSLDEAFVIQEQNVALNFIGGRGARPGVTKEKRIKYAREILQKEMLPHVGVSDF
CETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMALLFRGLFKNLMKEVR
MHAQKLLDKGQEYGLDAAVKPKLITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFA
STLSHLRRVNSPIGRDGKLAKPRQLHNSLWGMICPAETPEGAAVGLVKNLALMSYISVGS
QPAPILEFLEEWSMENLEEIAPSSIEDATKIFVNGCWVGIHRDAEQLMMTLRKLRRQMDI
IVSEVCMVRDIRDREIRIYTDAGRICRPLLVVENGKLLLKKRHIDLLKEREYNNFSWQDL
VASGVVEYIDCSEEETIMIAMSLEDLGSEEEKTYCNTYTHCEIHPAMVLGVCASIIPFPD
HNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLFYPQKPLVTTRSMEYLRFRELPAG
INSIVGIACYTGYNQEDSVIMNLSAVERGFFRSCFYRSYKDAETRRSGMQEELFEKPTRD
TCQGMRHAIYDKLDEDGIISPGMRVSGDDVIIGKTITLPESEDELEGQSRRFSKRDASVF
LRGSETGIVDQVMLTVNMDGDRFTKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRVEDMP
FTVEGITPDIIINPHAIPSRMTIGHLIEALQGKLGANKGEIGDATPFNDAVNVSKISNLL
QEYGYHLRGNEIMYCGHTGRKMNAQIFLTPTYYQRLKHMVDDKIHSRARGPVQILVRQPM
EGRAREGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYSVHVCNLCGLMCIANLRNNTF
ECKGCRNKTQISQVRLPYACKLLFQELMSMNIAPRLMVTK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatggcctacgctgatatagacgaagatatagcctatggtgatgaagatggggatgaa
atttctccagacatctggcaggaagcttgctggctggtgatctcctcttactttgatgag
aagggtctcgtgaggcagcagcttgactcctttgatgaattcataacaatgaccatccag
cgaattgttgaggactcacaggccattgatctccaagcagaggcacagcataccggtggt
gaactggaaaatcctcctcgtcatttgttgaagtttgagcaaatctacctgagtaaaccc
accaattgggaaaaggatggttacaactacaacatgatgccaaacgaggcccggctcagg
aacctgacctattcctctccattgtatgttgatattgtcaagactgtcatcaaggaagga
gagaagcctattgaacacaaggaagaaaaaatttacattggtaaaattccaatcatgctg
cggtctacctattgtctgctgagcggtctgactgatcgtgacttgcatgaagtgaatgag
tgtccccttgatcctggtggctacttcatcatcaatggttcagaaaaggtgcttattgct
caggagaagatggccactaacactgtgtatgtgttcagcatgaaggatggcaagtatgct
tacaaatgtgaaattcgttcctgcattgaacattcagctcgaccggtgtcaaccttatgg
atcaacatgatggcaagaggaggaagtagtgccaagaagtctgccattggccagcgaatc
attggtgtcctgccgtatgtgaagcaagaaattccagtaatgattgtgttccgtgctttg
ggctttgtggccgacagggatattctggaacacatcatttatgactttgatgatccagaa
atgatggaaatggtaaaaccctcacttgatgaagcttttgtgattcaggaacaaaatgtt
gccctgaattttataggagggagaggagctcggcctggtgtaaccaaagaaaagcgtatc
aaatatgccagggagattttgcagaaagaaatgttgcctcatgttggtgtttctgacttc
tgtgaaaccaaaaaggcctacttcttgggctacatggtacacagacttctactggcagca
ctgggtcgacgggagctggatgaccgtgatcactatggcaacaaaaggctggatcttgca
gggcctcttatggcattgctcttcagaggattatttaaaaatctaatgaaagaggttcgg
atgcacgcccaaaagctgctagacaaaggtcaagagtatggccttgatgctgcggtgaag
ccaaagctgatcactgacggcctcaagtactctttggccactggtaactggggagaccag
aagaaggcacatcaggccagggctggtgtgtctcaggtgttgaaccgcttgacgtttgcc
tccacactgtctcacctgcgtcgcgtcaactctcccattgggcgcgacggcaaactggca
aagcctcgtcagttgcataactccctgtggggaatgatttgccctgctgagactcctgaa
ggagctgctgtcggcctggtgaagaacctggccctcatgtcctacatctctgtaggatct
cagcctgcccccatcctggagtttttggaggagtggtccatggaaaacttagaggaaatt
gctccatcttctatagaagatgctacaaaaatctttgtgaatgggtgttgggttggcatc
catcgcgatgcagagcagctcatgatgacactgagaaagctgaggcgacagatggacata
attgtgtctgaggtgtgcatggtgcgagacatcagggacagggagattcgtatctacaca
gatgctggacgaatctgtcgccctctcttggttgtagagaatggaaagctactgctcaag
aaaagacacatagatttactcaaggagagagaatacaacaacttcagttggcaagatctg
gtagcaagtggtgtggttgaatacattgattgttcagaagaggaaactatcatgattgcc
atgtcacttgaagatcttggatcagaggaagagaagacttactgtaacacttacactcac
tgtgagatccatccagcaatggtgctgggtgtgtgtgcctccatcatccccttccctgat
cacaaccagtcaccccgtaatacttaccagagtgctatgggtaagcaagccatgggtgtg
tacataaccaacttccacgtcaggatggacaccctggcccatgtgctcttctatccacag
aagccacttgttactaccagatcaatggaataccttcgtttcagagagctaccagcaggg
atcaactctattgttggtattgcttgctacactggctacaaccaagaagattctgttatc
atgaacctttctgctgtggagagaggattcttcaggtcctgcttctatcgctcctacaaa
gatgctgagacaagacgctcaggaatgcaggaggagctatttgagaaaccaacaagagac
acatgtcaaggcatgcgtcatgctatttatgacaaactggatgaggatggcatcatttcc
cctggtatgcgtgtgtccggggacgatgtgatcattggcaagaccatcacactgccggaa
agcgaagacgaacttgagggacagtcaagacggttcagcaagagagatgcaagtgttttc
ctgagaggatcagaaactggtattgtagatcaagtcatgttgactgttaacatggatgga
gatcgcttcaccaaaatccgagtgcgatcagttcggataccacagattggcgacaagttt
gcctctcgtcatggccagaagggtacatgtgggattcagtacagggttgaggatatgcct
ttcacagttgaaggaattactcccgacatcatcattaaccctcacgccattccttctcgt
atgacaattggtcacttgattgaggcgttgcaaggtaaacttggtgccaacaagggtgag
attggtgatgctacaccattcaacgatgctgtcaatgtgtcaaagatctcaaatctgttg
caagagtatggttatcacttaagaggaaatgagatcatgtattgtgggcacacaggaagg
aagatgaatgcccagattttcttaactcctacatactaccagcgtttgaagcatatggtg
gatgacaagattcattcccgagctcgaggtccggtgcaaattcttgtgaggcaacccatg
gaaggtcgtgccagggagggtggtctacggtttggagagatggaacgagactgtcagata
gctcatggtgctgcacagttcctgcgagagcgactgtttgaagtcagtgatccttactcg
gtgcatgtctgcaacctgtgtggcttgatgtgtattgcaaacctcagaaacaacaccttt
gaatgcaaaggttgccgaaataagactcagatctcacaggtgcgtctcccatatgcatgc
aagttgctattccaagaactgatgtcaatgaacattgctccaagactgatggtgacaaag
tga
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integrated database retrieval system
