KEGG   Portunus trituberculatus (swimming crab): 123519512
Entry
123519512         CDS       T07853                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
ptru  Portunus trituberculatus (swimming crab)
Pathway
ptru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123519512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptru03041]
    123519512
   03036 Chromosome and associated proteins [BR:ptru03036]
    123519512
Spliceosome [BR:ptru03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123519512
 Complex B
    123519512
 Complex C
   U2 SnRNP specific factors
    123519512
Chromosome and associated proteins [BR:ptru03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    123519512
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_2 HEAT_ECM29 Htt_N-HEAT_1 XMAP215_CLASP_TOG Adaptin_N UME DUF2298
Other DBs
NCBI-GeneID: 123519512
NCBI-ProteinID: XP_045136847
LinkDB
Position
1:5789847..5804709
AA seq 1337 aa
MAAKKYTTEDLEAHIQEIQNRKAGLKNGSLPQPSGGGGGGGGGGGGGEGGITKEGERVRL
DGGGYFDSDIYDNSNGNKYANYVESIGVDDLDEEEDDGGTTIGGKKGGNYTAPQLFLNEM
VDKDHDPMAQYKRPTIADREDEYRARRIMQVISPERLDPFADGGKTPDMNARTYAHIMQE
ARLKGEEALIRKTMAERSKEGTLQVVSNGEAAKVAPRKRGRWDQTADDTPQAKKKSTWEA
ETPSVARWDETPGRAKGGETPGATPGQSTRMWDATPGHATPGHETPGHDKMTPSARRNRW
DETPKTDRGETPGHNSGWAETPRTDRGAGDPIQETPTPSASKRRSRWDETPAAQTPVATP
SGAMTPSTPHTPSMTPGMMTPGGITPGGTTPVGPKAIGMATPXPGQLVNMTPEQIHAFRW
EREIDERNRPMTDEELDALFPPGYEILPPPQGYVPIRTPARKLTATPTPMAGTPQGFYMQ
KEGSTPRHDDSQPKGNLPLLKPEDAQYFDKLLQDVDEESLSPEEQKERKIMKLLLKIKNG
TPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRVLYKLDDLV
RPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNT
TARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLV
EIIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPXWRGIRQHRGKGLAAFL
KAIGYLIPLMDGEYADYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPGYIK
EEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGTSEIVNRIVDDLKDENEQYRKM
VMETIEKIMANLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNALGSRVKA
YLPQICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYP
EVLGSILGALKGIVNVIGMHKMNPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGP
EYVSPREWMRICFELLELLKAHKKAIRRATVNTFGYIAXAIGPHDVLATLLNNLKVQERQ
NRVCTTVAIAIVAETCSPFTVLPGLMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIY
AVTSLLEDALMDRDLVHRQTACAAIKHMAIGVYGFGCEDAMIHLLNYVWPNIFETSPHLV
QAFMDSIEGLRVALGPQKILQYVLQGLFHPARKVRDVYWKIYNNLYIGAQDALVAGYPRI
NNTGTNVYSRDELDMLL
NT seq 4014 nt   +upstreamnt  +downstreamnt
atggcggccaagaagtacacgacggaagatttagaagcacacatacaggaaattcaaaac
aggaaagccggcttgaagaatggctcacttcctcagcccagcggcggcggcggcggcggc
ggtggtggtggtggtggcggcgagggaggcatcaccaaggagggggagagggtcaggctg
gacgggggcggctacttcgacagcgacatttacgacaactccaacggcaacaaatacgcc
aactatgtcgagtccattggggtggatgacctcgatgaggaggaggatgacggagggaca
acaataggaggaaagaaaggaggaaactacacagcacctcagttgttcctcaatgaaatg
gttgacaaggaccacgaccccatggcccagtacaagcggcccaccatcgcggaccgagag
gacgaatacagagcccgtagaatcatgcaggtcatttccccggagagactcgaccccttt
gctgacggaggaaagactccagacatgaacgctcggacctacgcccacatcatgcaggag
gcacggctcaagggggaggaggctctgatccgtaagaccatggcggagcggtccaaggag
ggcacactgcaggtggtgtctaacggtgaggcagccaaggtggcccccaggaagcgtggc
cgttgggaccagacagctgatgacacgcctcaggccaagaaaaagtccacctgggaggcg
gagacgccctctgtggcccgctgggatgagacccccggcagggccaagggaggcgagacc
cccggggccacccccggccagagcacccgcatgtgggatgccacaccgggccacgccaca
cccggccacgagacacccggccacgacaaaatgacgccctcggcccgccgcaacaggtgg
gacgagacgcccaagacagaccgtggcgagacacccggccacaacagcgggtgggctgag
acaccacgcaccgaccggggcgccggggaccccatccaggagacccccaccccaagcgcc
agcaagcgacggtcacgctgggacgagacccctgccgcccagacccctgtggctaccccc
tccggcgccatgacgccctccaccccccacacacccagcatgacccctggcatgatgact
cctgggggcatcacaccaggcggcactaccccagtgggccccaaggccatcggcatggcc
acgcctncgccgggccagctggtcaacatgacgccggagcagatccatgccttccgctgg
gagcgcgagatcgatgagcggaaccgccccatgacagatgaggagctggatgcgctcttc
cctcccgggtatgagatcctgccacccccacagggctacgtgcccatccgcaccccggcc
cgcaagctgacagccacgcccacccccatggccggcacgccccagggattctacatgcag
aaggagggcagcacgccgcgccacgacgactcccagcccaagggcaacctgccgctgctc
aagccggaggacgcacagtacttcgacaagttgctgcaggacgtggacgaggagagcctc
agcccagaggagcagaaggagcgtaagatcatgaagctgctgctcaagatcaagaacggc
acgccacccatgcgtaaggcagcactaaggcagatcacggacaaggcgcgggagttcgga
gcagggccgctcttcaaccagatcctgccgctgcttatgtcgcccacactggaggaccag
gagcgccatctgctggtgaaggtcattgaccgcgtgctgtacaagctggacgacctggtg
cgcccttatgtccacaagatcctggtggtgattgagccgctgctcatcgatgaggactac
tatgcccgtgtggagggcagggagatcatcagcaacctggccaaggccgccggcctggcc
accatgatctccaccatgaggcccgacatagacaacatcgacgagtacgtgcgtaacaca
acggccagggccttcgccgtggtggcctccgccctgggcattccctccctcctgcccttc
ctcaaggcggtgtgcaagagcaagaagtcgtggcaggcgcggcacacgggcatcaaaatt
gtgcagcagattgccatcctgatgggctgcgccatcctgccccacctgcgctccctggtg
gagattatcgagcacggcctggtggacgagcagcagaaggtgcgcaccatcaccgccttg
gccctggctgccctggccgaggctgccacgccctacggtattgagagctttgactctgtg
ctgaagcccntgtggcgtggcatccggcagcaccgcggcaagggtctggcggctttcctc
aaggccatcgggtacctcatcccactgatggacggagagtacgccgactactacaccagg
gaggtgatgctcatcctcatcagagagttccagagtcccgacgaggagatgaagaagatt
gtgctgaaggtggtgaagcagtgctgcgccacggacggcgtggagcccggctacatcaag
gaggagatcctgccacacttcttcaagcacttctggaaccaccgcatggccctggaccgc
cgcaactaccgccagctggtggacaccaccgtggagatcgccaacaaggtgggcacctcc
gagatcgtgaaccgcatcgtggacgacctgaaggacgagaacgagcagtaccgcaagatg
gtgatggagaccatcgagaagatcatggccaaccttggcgcagcagacatcgactcccgc
ctggaggagcagctcattgacggcatcctctacgccttccaggagcagaccacggaggac
gtggtgatgctgaacggcttcggcaccatcgtcaacgccctgggctcccgcgtcaaggcc
tacctgccccagatctgcggcaccatcctgtggcgcctcaacaacaagtcggccaaggtg
cggcagcaggcggcggacctcatctcccgtattgccgtggtgatgaagacctgccaggag
gagaagctgatgggccacttgggcgtggtgctgtacgagtacctgggggaggagtacccc
gaggtgctgggctccatcctgggggcactcaagggcatcgtcaacgtgatcggcatgcac
aagatgaacccgcccatcaaggatctgctaccgcgcctcaccccaatcctcaagaacaga
cacgagaaggtccaggaaaactgcatcgacctggtgggccgcatcgcagaccgtggccca
gagtatgtcagccccagggagtggatgcgaatctgctttgagctgctggagctgctcaag
gcacacaagaaggccatccggcgcgccaccgtcaacaccttcggctacatcgccnnagcc
atcggcccccacgacgtgctggccacgctgctcaacaacctgaaggtgcaggagcggcag
aacagagtgtgcaccacggtggccatcgccatcgtggcggagacctgctcgcccttcacg
gtgctgccgggcctcatgaacgagtaccgcgtgccggagctcaacgtgcagaacggcgtg
ctcaagtcactctccttcctctttgagtacatcggggagatgggcaaggactacatctat
gctgtcacctccctgctggaggacgccctcatggaccgcgacctggtccaccgtcagact
gcctgcgccgccatcaagcacatggccatcggcgtgtatggcttcggctgcgaggacgcc
atgatccacctcctcaactatgtctggcccaacatctttgagacctcaccccacctggtg
caggccttcatggacagcatcgagggactcagggttgccctcggaccacagaagatccta
cagtacgtcctgcagggcctgttccaccccgccaggaaagtgcgtgacgtgtactggaag
atctacaacaacctgtacattggagctcaggacgcactggtggccggctaccctcgcatc
aacaacactggaaccaacgtgtacagcagagacgagctggacatgttactctaa

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