KEGG T07853: 123520006

Portunus trituberculatus (swimming crab): 123520006

Entry

123520006         CDS       T07853

Name

(RefSeq) TATA box-binding protein-like 1

K03120

transcription initiation factor TFIID TATA-box-binding protein

Organism

ptru Portunus trituberculatus (swimming crab)

Pathway

ptru03022

Basal transcription factors

Brite

KEGG Orthology (KO) [BR:ptru00001]
09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123520006
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptru03000]
    123520006
   03021 Transcription machinery [BR:ptru03021]
    123520006
Transcription factors [BR:ptru03000]
Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    123520006
Transcription machinery [BR:ptru03021]
Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     123520006
  RNA polymerase III system
    TFIIIB
     123520006
  RNA polymerase I system
    SL1/TIF-1B
     123520006

SSDB

Motif

Pfam:

TBP

Other DBs

NCBI-GeneID:

123520006

NCBI-ProteinID:

XP_045137723

LinkDB

Position

46:complement(31303587..31309165)

AA seq 207 aa
MAGVPKVTGQGQPAEVREFIDIEIDNIWFHVSTNTKINLQYIDHAADCSSTFLSSGELQL
QLQDSEFSVILNKRGTVRGVAGCVTEAAAALAAMKAMMLLKTLGYHIRAHNFRITNVVAR
GQVPFRIDIKSLHQDNKKHLQYSFGENGEEQQKLTTFIPSVHTTVNITPHGKLFFFSPNV
EKLLQASKYIYPRLRPYAVLPTKPSQL

NT seq 624 nt +upstreamnt +downstreamnt
atggctggtgttcccaaagtgacgggccagggccagcctgccgaggtgcgagagttcatt
gacatcgagattgacaacatttggttccacgtgagcaccaacaccaagatcaacctgcaa
tacattgaccacgccgcggactgcagcagcaccttcctgtcgtctggagagcttcaatta
caactgcaagattcggagttctctgtgattctcaacaagcgaggaacagtgcgtggcgtt
gcagggtgtgtgacagaggcagcagcagctttggcggccatgaaggcaatgatgctcctg
aaaacgctgggatatcacatcagggcacataacttcaggatcacaaatgtggttgctaga
ggacaggtgcccttcagaatagacattaagtcactgcaccaggacaacaagaagcatcta
caatacagctttggagagaatggagaagagcagcaaaaactgacaaccttcatcccttca
gttcacaccacagttaatattactccccatgggaaattgtttttctttagtcccaatgtg
gagaaattgctgcaggcttctaagtacatctacccacgcctgcgtccctacgctgtcctt
cccaccaagcccagccagctgtag

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