Portunus trituberculatus (swimming crab): 123520301
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Entry
123520301 CDS
T07853
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ptru
Portunus trituberculatus (swimming crab)
Pathway
ptru04120
Ubiquitin mediated proteolysis
ptru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123520301
04120 Ubiquitin mediated proteolysis
123520301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptru04121
]
123520301
Enzymes [BR:
ptru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123520301
Ubiquitin system [BR:
ptru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123520301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_11
FancD2
zf-RING-like
zf-ANAPC11
zinc_ribbon_16
Prok-RING_4
zf-C3HC4_4
FANCL_C
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
123520301
NCBI-ProteinID:
XP_045138417
LinkDB
All DBs
Position
46:complement(11487228..11502005)
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AA seq
652 aa
AA seq
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MPAPMPVGGLTMASFAFTAAVIGNAYYQKRQFYPSVVYITKSNPSMAAIYLLAFTLVILL
GKLLKKVFFGSLRAAEFEHLVERSFYAVTETCLAFTVFRDDFSPKFVALFTVLLFLKAFH
WLADYRVDFMERSPVITLLFHTRVSSLLLLLSLLDLVLVNHAYHSTITRGASVQLVFGFE
YAILLTVAFNIAVKYICHTVDLQSQNPWENKAMYLLYTELIMGLFKVVLYLIFLLIMIRI
HTFPLFIIRPMYLTMRSFKRALNDVVLSRRAISNMNTLYPDATPEELTAVDNVCIICREE
MLTGAKKLPCGHIFHASCLRSWFQRQQTCPTCRMDILRQPPQTPAPPPPQPQPQPQAQPP
PPQPQPQGQQQIPNPFERLFGGFHMPMGPMQVGVPPFPFPAAPGQQPQPQPATSSATAGS
ATTTPAAGAGGSGSNSNTTASTTTTTTTSSSSSSSTTTSSSSFTSTATNQPGASIPAPPL
GMMPPFFPFIPFNIPPPRPPPNFSAMTDEEVRRMEGSERQHVEARVRVLRNIQTLLDAAV
VQMNQYASVVASLDMATSDASTTRTSSSNAEQTQSTQSGTEAAQAAAPMSPATTEPTPST
SGHKHTAPQAEDKAGSSKTSEKPQVSSPPTQQVAEEDDQQQEIRRRRLERFS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccggccccaatgcctgtagggggcctcaccatggcatccttcgccttcacagctgct
gtcatcggcaacgcctactaccagaagcgccagttctatccctcggtggtgtacatcacg
aagtcaaaccccagcatggcggccatatatctgcttgccttcacactggtcatcttactt
ggcaagttactcaagaaagtgttctttggctccctaagggcagctgaatttgagcatttg
gtggaacgatccttctatgcagtcacagagacctgcctggccttcactgtgttcagggat
gatttctcacccaagtttgtggcactgtttacggtgctacttttcctcaaggccttccac
tggctggctgattatagagtggacttcatggagcgctcacctgtcatcacccttctcttc
cataccagagtgtcatccctgttgctgctactgagcctcctggatcttgtgctggtaaac
catgcttatcactctaccatcacacgtggtgcctctgtccagctggtgtttggctttgaa
tatgccatcttgctgacggtggccttcaacattgctgtgaagtacatttgtcacacggtg
gatctgcagtcacagaacccctgggaaaataaagccatgtatttgttatatactgaactc
atcatgggcctcttcaaagtggtgctgtaccttattttcctgttgataatgatccgtatc
cacaccttcccgctcttcatcatcagacccatgtacctgaccatgagatcattcaaacga
gccctcaacgacgtggtgctgtctcgccgtgctatcagcaacatgaacacactataccct
gatgccacacccgaggagctgacagctgtggataatgtgtgcatcatctgccgggaggag
atgctgacaggtgccaagaagctcccctgtggccacatctttcatgcctcctgcctgcgg
tcctggttccagcgacagcagacatgccccacttgccgcatggacatcttgcgccagcca
ccccagaccccagctcccccaccccctcaacctcaaccacaacctcaggctcagccccca
ccaccacagcctcagccacagggacagcaacagataccaaatccctttgaaaggctgttt
ggtggcttccacatgcctatggggcccatgcaggttggagttcctccattccccttccct
gcagcacctgggcaacagcctcaaccacagccagccaccagttcggccacagctggttct
gccaccaccactcctgcagcaggtgctggtggtagtggcagcaacagcaacacaacagct
tccaccactaccaccaccactacaagcagcagcagcagcagcagtaccaccaccagcagt
agtagcttcacttccactgccaccaatcaaccaggggccagcattcctgcccctccactt
ggcatgatgccgccattcttcccattcataccattcaatattcctccccctcggccgcct
cccaacttctcggccatgacagacgaggaggtgcggcggatggaaggctccgagcggcaa
catgtggaggcacgagtgagggtcttacggaacatacagaccctcctggatgctgctgta
gtccagatgaaccagtatgcttcagtggttgcctctctcgacatggccacaagtgatgct
tccaccactaggacctcatcttcaaatgcagagcagacacagtcaacccaaagtgggaca
gaggctgcccaggctgctgctcctatgtcccctgccaccactgaacccacaccatcaacc
tcagggcataagcacacagctccccaagcagaggataaggcagggagcagcaagacatca
gagaaacctcaagtttcatcaccaccaacccaacaggtggcagaggaggatgaccagcag
caggagatcaggaggagacggctggagaggttctcttaa
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