Portunus trituberculatus (swimming crab): 123520497
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Entry
123520497 CDS
T07853
Name
(RefSeq) LOW QUALITY PROTEIN: protein SMG8-like
KO
K18734
protein SMG8
Organism
ptru
Portunus trituberculatus (swimming crab)
Brite
KEGG Orthology (KO) [BR:
ptru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptru03019
]
123520497
Messenger RNA biogenesis [BR:
ptru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123520497
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
123520497
NCBI-ProteinID:
XP_045138734
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Position
47:complement(3627151..3657917)
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AA seq
981 aa
AA seq
DB search
MFWVAGSGSSQQQRNDHLTKMELNYKISSQQGHFTLPTKWMPQDGAGRQRVAVVAVFGRS
GLDAGGCKAGAVEAMVGQQIFSRDLTTPIDIDQSVLTGVDGYYDMSRRTIYLHLTAAYDT
ATLVSSLEKMKTLLQEKGFLMAWSSLKLSFAKSLLVLFSVSHLLLLCHPSHTFDITYIHL
FRTLDAIRSKAHSHISEILRSVPGISKDWISFGRLCAPRVLFLFSSRLLPPQIKGGGVGG
QDGASHRVRGVGGRGSNPSSPIRNLELALEDQIYRLLRKSRVITNISANSLFALPNNQAY
VYIMEEGQENMAAAPLISSTLLQLCGASSSSPSSSSASSTSVTDILAGDLSHLTVGGAGR
NEKGVGGRQGGPHTPSDTTTSTTAAATTLSSSILSAVATERKRNLEHRFTIFLQQHIDQA
LGKGFDDNVGRHSGPSFFMVPRASVWFEAVNRIYNFYVCDPQEKDNKAKQVLTSLQNLVE
TEVRFSASRCAKILPIALSAYKDGLPPHYTQMHHQEKLDLALTILSGQARGPMYDNYVAQ
LEEACQRVWLDGRMGCEVLSLTGNTCHHPRHSVEGEEPAGGGGGGERGMPTLPHNSGVTY
ISFCNCGRRQGQRDDPFSTHEANHVFYSHLADTCCSRLDSISFPTFKPSVSNARAAKVSS
SDEEDLTTPGHADTSCLCGSXHHRPQSLLVISVCGGASQMVITLTKEDVTTQMIIIDRGI
IRQPSTTEYLPGMLTTASPSGLLPQTSSWALTCLGPSSLYSHNAGICDQPGFLPGTNFLL
PWDVTVKIEDREKWPAIADTLGKKALLLKNKKNKCGDLHEFSVKIFLGVEYECRGGHRFM
LASPDRHLKASPSGLVKDNAVKIANADMPLYFPCPCSRSGGGIMNGQLMRLHVVTPKAPV
NVTLSPQVQPGPDPCPRYIPQPPSTPPVKLSASAYWVLRLPYAYVGDQGPHYPPDPRQPT
PPSFARLLKGCYGISQVMLDR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgttttgggtggcgggcagcggctcgtcacaacaacaacgaaatgatcacttgacgaaa
atggagcttaactacaaaatatcgtctcaacagggccacttcaccttacctacaaaatgg
atgccacaagatggggctggaaggcagagggtggcggtggtggcagtgtttggccgcagt
gggctggatgctggaggctgcaaagcgggagctgtcgaggcaatggtgggtcagcaaatc
ttctctcgtgacctcactacacccattgatattgaccagagtgtgttgacaggtgtggac
gggtattacgacatgtcacgtcgcacaatttacctccatctgacggctgcctatgacacc
gccacgttggtcagctcgttggagaagatgaagacactgctacaggagaagggcttttta
atggcatggtcctctctgaaactgtcatttgctaagagtctactggtcttattttccgtg
tcacatctcctgctgctgtgtcacccctcccacacgtttgacatcacctacatacacctc
ttccgcaccttggatgctatcaggtccaaagcacacagccacatctcagaaatcctacga
tctgtgcctggaataagcaaggactggatatcgtttggtcgtttatgtgcaccaagagta
ctttttctcttctcctctcgccttctgcccccacagatcaagggaggcggggtgggaggc
caggatggggcatcacacagggtccggggggtagggggacgcgggtcaaatccttccagc
cccattcggaacctggaactagcgttggaagaccaaatatacagattgctaaggaaaagt
cgggtcatcactaatataagtgccaactctctctttgcactcccaaacaaccaagcgtat
gtttatattatggaggaaggacaggaaaacatggccgctgcacctctcatctcttccacc
ctcctccaactgtgcggggcatcctcatcatccccctcctcctcctctgcctcttctacc
tcagtgactgacatattagcaggtgatctctcccatctcacagtaggaggggctggaagg
aatgagaaaggggttgggggaaggcaaggaggtcctcacaccccctcggacaccaccacc
agtaccactgccgctgctaccaccctcagctcctctattttgtctgctgtggcaactgag
aggaagaggaacttggaacacagattcacgatatttcttcagcaacacattgaccaagct
ctcggcaagggttttgatgacaacgtaggcagacattcagggcccagtttcttcatggtt
ccgagagcaagtgtttggtttgaagcggttaatcgaatttacaatttctacgtttgtgat
ccacaagagaaagacaacaaagcaaagcaggttctaacgagtctacagaacctcgtcgag
acagaggttcgattctccgccagtcggtgtgccaagattctccctatcgctctctctgca
tacaaggatggtctgcccccacactacacacagatgcaccaccaggagaagcttgatcta
gcactgacaatcttaagtggccaagcacgcgggccaatgtatgacaattacgtggcccag
ctggaggaggcgtgtcagcgggtgtggcttgatggtcgtatggggtgtgaagtgttgtcc
ctcactggcaacacctgccatcacccgaggcactctgtggagggggaagagcctgctggt
ggtggtggggggggagagaggggaatgccaaccttaccacacaactcaggggtcacctac
atcagcttctgcaactgtggacgtcggcaaggtcaacgagatgacccattttccacgcac
gaggctaatcacgttttctacagccatcttgcagatacttgctgttcccgtttggattca
atttccttccctacctttaagccaagcgtgtctaatgcaagggctgccaaagtctccagc
tcagatgaagaggacctgaccacaccaggacatgcagatactagctgcctctgtggatcc
tagcatcacaggcctcagtctttgttagttatcagtgtatgtggtggagcatcccaaatg
gtgatcacacttacaaaggaggatgttacgactcaaatgattatcatagatcgtggcatc
atccggcagccatctaccacagagtatctaccagggatgttgacaactgcttccccctcc
ggcctgctcccccagacctcatcttgggctctcacctgcctgggcccctcctctctctac
tcccacaatgccggtatctgtgaccagcctgggttcttgccaggcacaaattttcttctc
ccttgggatgtgacagtcaagattgaagatcgagaaaaatggccggccatagccgacact
cttggcaagaaggcactgctcctcaaaaataagaagaataagtgtggagacctgcatgag
ttttcagtgaagattttccttggtgtcgagtatgagtgccgaggaggacaccgttttatg
cttgcttcccctgacagacacctaaaggcctcaccatcaggacttgtcaaagataatgct
gtcaagattgctaatgctgatatgcctctctattttccatgtccctgcagtcgcagtggt
ggtggaatcatgaatggccagctgatgcgactccatgttgtgactccaaaggcaccagta
aatgtgaccctttccccgcaagtccagcccggccctgatccctgtccccgatacatccct
cagcccccctccactccccccgtcaagctttctgcttcagcatattgggtccttcgctta
ccatatgcctatgttggtgaccagggaccccattacccacctgatccccgccagcccacc
ccaccctcgtttgctcggctcttaaaaggatgttatggtatctcacaggtcatgttagat
aggtga
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