Paraburkholderia terricola: CUJ90_04795
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Entry
CUJ90_04795 CDS
T05812
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pts
Paraburkholderia terricola
Pathway
pts03030
DNA replication
pts03430
Mismatch repair
pts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUJ90_04795
03430 Mismatch repair
CUJ90_04795
03440 Homologous recombination
CUJ90_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pts03032
]
CUJ90_04795
03400 DNA repair and recombination proteins [BR:
pts03400
]
CUJ90_04795
Enzymes [BR:
pts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CUJ90_04795
DNA replication proteins [BR:
pts03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CUJ90_04795
DNA repair and recombination proteins [BR:
pts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CUJ90_04795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
HROB
Motif
Other DBs
NCBI-ProteinID:
AXE91762
LinkDB
All DBs
Position
mHS1_A:1085865..1089455
Genome browser
AA seq
1196 aa
AA seq
DB search
MSPMSDPRFVHLRVHSEFSIADGIVRLDDIVKAAAKDGQGALALTDLGNAFGLVRFYKEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKDRRGYLNLCELLSKASLTNQYRGRAEIE
AGWLESGLGEGLLALSGAQQGDIGLALAAGNEEAAKRNALHWAKVFPGGFYIELQRCAQP
GGEQYVRQAVTLAAALKLPVVATHPMQFMTPDDFTAHEARVCISEGDILANPRRQKRFTP
EQYFRTQQEMAALFADIPSALANTVEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVHL
SKEGLEKRLEQLYPDPAEREAQRETYYQRLEFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGVTDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIAD
AMKEEPLLQERFDNEDEVHQLLELAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKEDWSLAQVPLDDPA
SFSILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKAEEMAE
HRALFREGAAKNGLTGEKADEIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLKAHHPAEF
MAANMSLAMDDTEKVKILFEDCLANKMAVLPPDVNLSAYRFEPVAEPDGKRSKTIRYGLG
AIKGSGQNAIEEILRAREDGPFIDIFDFCNRVDRRIVNRRTMEALIRAGAFDTLHANRAQ
LIASVSLAMEAAEQASANAMQAGLFDMGDAPSQGHELVDEPEWPEKKKLQEEKAALGFYL
SGHLFDAYKNEVRRFVRQKIGELKEGRDKLVAGVIASLRTQMTQRGKMLIAVLDDGTGQC
EVTVFNEIFEAHKQLFREDELLVVQGQARNDAFTGGIRFTVDTVMDLGRARCRYAEAVKV
QMNGNADALALRRVLEAHSADKDEPQAAAAPAASSRSGGGNGNGGGRNGGGYGGGDNGRQ
RQAVQIPNGLAVQVVYRSQNAEGAMRLGDAWRVKPTDELLAALRGEFAGSSIEIVY
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgtcagatccccgcttcgttcatctccgcgtccactccgaattctcgatt
gccgacggcatcgtgcgtcttgacgacatcgtcaaggcggctgccaaagacggtcagggt
gcgctcgctctcaccgatctcggcaacgcgttcggcctcgtccgtttctataaggaagcc
cgcggcaaaggggtcaaacccattgccggctgcgacgtctggatcaccaatcccgacgac
cgcgacaagccttcccgtttgctgctgctggtgaaagaccggcgcggctacctgaatctg
tgtgagctgctcagcaaggcgtcgctcacgaatcagtatcgcggccgcgccgaaatcgag
gccggctggctcgaatccggcctgggcgaaggcttgctcgccttgtccggcgcccagcaa
ggggatatcggtctcgcgctcgctgcgggtaacgaggaagcggcgaagcgcaacgcgttg
cattgggcgaaggtgtttccgggcggcttctatatcgagttgcagcgttgcgcccagccg
ggcggcgagcagtatgtgcggcaggccgtcacgctcgccgcggcgctgaagttgccggtg
gtcgccacgcatcccatgcagttcatgacgccggacgacttcaccgcgcacgaagcgcgc
gtgtgtatttccgaaggcgacatccttgctaatccgcgccgccagaagcgcttcacgccg
gaacagtatttccgcacccagcaagaaatggccgcgctgttcgcggacattccgtcggcg
ctcgccaataccgttgaaatcgccaagcgctgcaacctcacgctggaactcggcaagccc
aaactgccgctgtttcccacgcccgacggcatgtcgctcgacgactacctcgtgcatctg
tcgaaagagggccttgaaaagcgcctcgagcagttgtacccggaccccgcggagcgcgaa
gcgcagcgcgaaacgtattaccagcgcctcgaattcgagtgcggcacgatcatcaagatg
ggctttccgggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggc
gtgccggtcgggccgggccggggctccggcgcgggctcgctggtcgcctacgcgctcggc
gtgaccgacctcgatccgctgcgctacaacctgctgttcgaacgtttcctgaatcctgaa
cgggtgtcgatgcccgacttcgacatcgacttctgccagcacggccgcgaccgcgtgatc
cagtacgtgaaggaaaagtacggcgcggacgcggtgtcgcagatcgccaccttcggcacg
atggcggcgaaggcggcggtgcgcgacatcggccgggtgctcgatctgggctacatgttc
accgacggcatcgccaagctgatcccgttcaagccgggcaagcacgtcaccatcgccgac
gcgatgaaggaagagccgctgttgcaggagcgcttcgacaacgaagacgaagtgcatcag
ctgctcgaactcgcgcagcgcgtggaaggcttgacgcgtaacgtcggcatgcacgcgggc
ggcgtgctgatcgcgcccggcaagctcaccgatttctgcccgctctatacgcagggcgac
gaaagcggcgtggtcagccagtacgacaaggacgacgtcgaagcggtcggcctggtgaag
ttcgactttttgggtctcaccacgctgaccattctcgactgggccgagcgctatatccgc
cgtctcgatccgtcgaaggaagactggtcgctcgcgcaggtgccgctcgacgaccccgcg
tcgttctcgatcctgaagaaagcgaatacggtcgccgtgttccagttggaaagccgcggc
atgcaaggcatgctgaaagacgcgcagcccgaccgcttcgaagacatcatcgcgctcgtc
gcgttgtaccgtccgggcccgatggacctgatcccgagcttctgcgcccgcaagcacggc
cgcgaagtggtggagtatcccgatccgcgcgtggaacctgttctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctg
ggcggcgccgacctgctgcgtcgcgcgatgggcaagaagaaggccgaggaaatggccgag
caccgcgcgctgttccgcgaaggcgccgcgaagaatggcctgaccggcgagaaagccgac
gaaatcttcgacttgatggagaagttcgcgggttacggcttcaacaagtcgcacgcggcc
gcgtatgcgctgctggcgtactacaccgcgtggctcaaggcgcatcatccggcggaattc
atggcggccaatatgtcgctcgccatggacgacacggagaaggtcaagatcctgttcgag
gactgtctcgcgaacaagatggcggtgctgccgccggacgtgaatctgtcggcgtatcgc
ttcgagccggtcgcggaaccggacggcaaacgctcgaaaaccatccgctacggtctgggc
gcgatcaagggcagcggccagaatgcgatcgaggaaatcctgcgtgcgcgcgaagatggt
ccgttcatcgacatcttcgatttctgcaaccgtgtcgaccgccgcatcgtcaatcgccgc
acgatggaagcattgattcgcgccggcgcgttcgacaccttgcatgcgaatcgcgcgcaa
ctgatcgcatccgtttcgctcgcaatggaagcggccgagcaggcgagcgccaatgcgatg
caggcgggtctgttcgacatgggcgacgcgccgtcgcaaggtcacgaactggtcgatgaa
ccggaatggccggaaaagaagaagctgcaggaagagaaggccgcgctcggcttctacctg
tcgggccatctgttcgacgcgtacaagaacgaggtgcgccgcttcgtgcgccagaagatc
ggcgaattgaaagaaggtcgcgacaagctggtcgcgggtgtgatcgcgtcgctgcgcacg
cagatgacccagcgcggcaagatgctgatcgccgtgctcgacgacggcaccggccaatgc
gaagtgacggtattcaacgagatcttcgaagcgcacaagcagttgttcagggaagacgaa
ctgctggtcgtgcaaggccaggcgcgcaacgacgcattcaccggcggcatccgcttcacc
gtcgatacggtgatggatctcggccgcgcgcgctgccgttacgccgaggccgtcaaggtg
cagatgaacggcaacgcggacgcgctggcgctgcggcgcgtgctcgaagcgcatagcgcg
gacaaggacgagccgcaagcggccgcggccccggcggcttcatcgcgaagcggcggcggc
aatggcaacggcggcggccgtaacggtggcggatatggcggcggcgacaatggccgtcag
cggcaggcggtgcagattccgaacgggcttgccgtgcaggtggtgtatcgcagccagaac
gccgaaggcgccatgcggttgggcgacgcctggcgcgtgaagccgaccgacgaattgctc
gctgcgttgcgcggcgagttcgcgggaagctcgatcgagatcgtttattga
DBGET
integrated database retrieval system
