Paraburkholderia terricola: CUJ90_05195
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Entry
CUJ90_05195 CDS
T05812
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pts
Paraburkholderia terricola
Pathway
pts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUJ90_05195 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pts03019
]
CUJ90_05195 (pnp)
03016 Transfer RNA biogenesis [BR:
pts03016
]
CUJ90_05195 (pnp)
Enzymes [BR:
pts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CUJ90_05195 (pnp)
Messenger RNA biogenesis [BR:
pts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CUJ90_05195 (pnp)
Transfer RNA biogenesis [BR:
pts03016
]
Prokaryotic type
tRNA degradation factors
CUJ90_05195 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
DUF5813
S1_2
Motif
Other DBs
NCBI-ProteinID:
AXE91832
LinkDB
All DBs
Position
mHS1_A:1164539..1166680
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AA seq
713 aa
AA seq
DB search
MFNKIVKEFKWGQHNVRLETGEIARQASGAVIVDVEDTVVLATVVGAKTAKPGQDFFPLT
VDYLEKTYAAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFYNEVQVVIHVLSL
NPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYINNEYVLNPTRPQMKESALDLIVA
GTERAVLMVESEAQQLTEEVMLGAVVFGHEQMQIAIDAIHDLVREGGKPEWDWQPAAKNE
PLIARVTELAQADLLAAYQIRDKQARSAKLKEIYAATSARLEEEASASGIVVADKASVGN
VLFDIEAKIVRTQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVVAT
LGTKGDEQNIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALAACL
PSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGNKF
AVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHILG
KMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDGVV
TIASTSSEGMAEAKKRIENITLEVEVGQVYEGTVLKLLDFGAIVNILPGKDGLLHISEIA
NERIKDINDYLKDGQQVKVKVIQTDEKGRVRLSAKALLNDPASGAPQGEPTPQ
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttcaataagatcgtcaaagagtttaagtggggacaacataacgttcgcctcgagacg
ggcgaaatcgctcgccaggcgagcggtgcggtgatcgtcgatgtcgaggacaccgtcgtg
ctggccaccgtggtcggtgccaagaccgccaagccgggccaggacttcttcccgctgacc
gtcgactacctcgaaaagacctacgccgccggcaagatcccgggcggcttcttccgccgc
gaaggccgtccgtcggaaggcgaaacgctgatttcgcgcctgatcgaccgcccgctgcgt
ccgctgttcccggaaggcttctacaacgaagtccaggtcgtgatccacgtcctgtcgctg
aaccccgaaattcccgccgacatccccgcgctgatcggcgcgtcggcggcgctcgccgtc
tccggtctgccgttcaacggcccggtcggcgcggcacgcgtggcctacatcaacaacgaa
tacgtgttgaatccgacgcgtccgcaaatgaaggaatcggcgctcgacctgatcgtcgcc
ggtacggaacgcgcggtgctgatggtggagtcggaagcgcagcagctgaccgaagaagtg
atgctcggcgccgtggtgttcggccatgagcaaatgcagatcgcgatcgacgcgattcat
gacctggtccgtgaaggcggcaagccggaatgggattggcaaccggcggcaaagaacgaa
ccgctgatcgcacgcgtgacggaactggcgcaagccgatctgctcgccgcttatcagatc
cgcgacaaacaggcccgttcggccaagctgaaggaaatctacgcggcgacgtcggcccgg
ctggaagaagaagcctcggcaagcggcatcgtggtagccgacaaggcgagcgtcggcaac
gtgctgttcgacatcgaagcgaagatcgtccgtacgcagatcctgaacggcgagccgcgt
atcgacggccgcgacacgcgcacggtgcgcccgatcgaaatccgtaccggcgtgctgccg
cgtacgcacggttcggccctgttcacgcgcggcgaaacgcaggcactggtggtcgcgacg
ctcggcacgaagggcgacgagcagaacatcgacgcgctcgaaggcgagtaccgcgaacgc
ttcatgcttcactacaacatgcctccgttcgcgaccggcgaaacgggccgcgtcggttcg
ccgaaacgccgcgaaatcggtcacggccgtctcgccaagcgcgcgctggccgcgtgcctg
ccgagcgccgacgaattcggctactcgattcgcgtggtgtcggaaatcacggaatcgaac
ggttcctcgtcgatggcttcggtgtgcggcggctgcctcgcgctgatggacgccggcgtg
ccgatgaaggcgcacgtcgcgggcatcgcgatgggtctgatcctcgaaggcaacaagttt
gccgtgctgaccgacatcctcggcgacgaagaccatctcggtgacatggacttcaaggtg
gcgggtaccgagcaaggcgtcaccgcgctgcagatggacatcaagatccagggcatcacc
aaggaaatcatgcaggtcgccctcgcgcaagcgaaggaaggccgcatgcacattctcggc
aagatgacctcggctgtctcgggcgcgaacacgcaactgtcggagttcgcaccgcgcatg
atcaccatcaagatcaatccggaaaaaatccgcgacgtgatcggcaagggtggttcggtg
atccgcgcgctgaccgaggaaaccggcacgacgatcgacatttcggacgacggcgtcgtc
accatcgccagcacgagcagcgaaggcatggccgaagcgaagaagcgtatcgagaacatc
acgctggaagtcgaagtgggccaggtgtacgaaggcactgtgctcaagctgctcgatttc
ggcgcgatcgtgaacatcctgccgggcaaggacggtctgctgcacatctccgagatcgcc
aacgagcgtatcaaggacatcaacgactacctgaaggacggccagcaagtgaaggtcaag
gtcatccagacggacgaaaagggccgcgtgcgtttgtcggccaaggcgttgctgaacgac
cccgcatcgggtgcgccgcaaggcgagccgacaccgcagtaa
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