Paraburkholderia terricola: CUJ90_07800
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Entry
CUJ90_07800 CDS
T05812
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pts
Paraburkholderia terricola
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pts03021
]
CUJ90_07800
Transcription machinery [BR:
pts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CUJ90_07800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
HTH_20
HTH_Crp_2
KORA
Motif
Other DBs
NCBI-ProteinID:
AXE92268
UniProt:
A0A1M6ISL1
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All DBs
Position
mHS1_A:1713315..1714397
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AA seq
360 aa
AA seq
DB search
MPKSKRRLPQAESETISRATSASVEESSASEAEDEIAEERELDDRQGGAEEAVDAREGAS
EVVPDADDFRALLQAELTADTIQHYLNRISVKPLLTVEEEQKYSRLAKAGEFDARQVMIE
RNLRLVVSIAKGYLNRGVPLLDLIEEGNLGLMHAIEKFDPTRGFRFSTYATWWIRQSIER
AIMNQARTVRLPVHVIRELNQVLRAKRHLEKNSMNSGEAAERRDASIDDIAYLTGKTTDE
VTDILALNEHTASLDAPLDLDPASSLLDLLSDDQSQSPDAEVQHRELETLTRAWLARLSD
KHRHVIERRFGLNHIEPATLEELADEMGLTRERVRQIQQEALVRLKRFFASNGVRKDAVL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcgaagcgccgcctgccgcaagccgaatctgagacgatcagccgtgccacg
tccgcttcggtggaggaaagcagcgcttcggaagcggaagacgagatcgcggaagagcgc
gaactcgacgatcgccagggcggcgcggaggaagccgtcgacgcccgcgaaggtgcgagc
gaggtcgtgccggacgccgacgatttccgcgcgctcctgcaagccgagttgacggccgac
acgatccagcattacctgaaccggatcagcgtcaagccgctcctcaccgtcgaggaagag
cagaagtattcgcggctcgcgaaggcgggcgagttcgacgcccggcaagtaatgatcgag
cgcaatttgcggctcgtcgtcagcattgcgaagggttatctgaaccgcggcgtgccgctg
ctcgatctgatcgaagagggcaacctcggcttgatgcacgccatcgagaaattcgacccc
acgcgcggcttccgattttccacttacgccacgtggtggatccgtcagagcatcgagcgc
gcgatcatgaaccaggcgcgcaccgtgcgtttgccggttcacgtgattcgtgaactcaat
caggtgctgcgcgccaagcgccatctcgaaaagaattcgatgaattcgggcgaggcggcc
gagcgccgcgacgccagcatcgacgacattgcctatctgaccggcaaaaccaccgacgaa
gtcaccgacattctcgcgctcaacgagcacaccgcgtcgctggatgcgccgctcgacctc
gatccggcgagcagcctgctcgatctgctgtccgacgaccaaagccagtcgccggacgcc
gaagtgcagcatcgcgaactggaaaccctcacgcgcgcatggctcgcgcgcttgtcggac
aagcatcgtcatgtgatcgagcgccgcttcgggctcaatcacatcgaacccgccacgctc
gaggaactggccgacgaaatgggcctcacgcgcgaacgtgtgcgccagatccaacaggaa
gcgctcgtgcggttaaagcgcttcttcgcctccaacggcgttcgcaaggacgccgttctc
taa
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