Paraburkholderia terricola: CUJ90_11160
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Entry
CUJ90_11160 CDS
T05812
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pts
Paraburkholderia terricola
Pathway
pts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CUJ90_11160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pts03400
]
CUJ90_11160
Enzymes [BR:
pts01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CUJ90_11160
DNA repair and recombination proteins [BR:
pts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUJ90_11160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
RecD_N
SLFN-g3_helicase
AAA_22
AAA_25
DEAD
MukB
CbiA
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AXE92830
LinkDB
All DBs
Position
mHS1_A:complement(2519553..2521742)
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AA seq
729 aa
AA seq
DB search
MSRLEHTGSTPPELDDIDIGVNLPAPADFSIALAEGFARRIGTLARRGGASGEAVKWAAR
GAFAASRATAEGHVCVPLAVLARRFEASGAEVRAALFASGMASDGSQSAAALRPLVVDGQ
GRLYLARYYDYERRLARSLVAHAGAAAQRVREDQARGRDHVAGGGDAATGADASADASAK
TLHERLLRYFGPPKDDELDWQRVAAVMALSGWLTIVSGGPGTGKTTTVVGVLACLLDARA
DLRIALAAPTGKAAQRMQEALLARAGELPPALAARLPQTSYTLHRLLGSGPGGRFRHHRD
NPLPYDVVVIDEASMIDVAMAAHLLDAIAPRTRLVMLGDKDQLAAVEAGAVFAELSARPD
FTPAGMQRIAAALGIEEARLAQALPRASRSVHEQRGGRSTREEAPDDFHAPSDDLFARAD
APDAVVARSDDDLFEHAVSSAYASAMGSAASPLQSPLADCVVWLERNYRFGLESPIGRLS
LAIRNGSANAALDVMSLDPLEPCAAALHEDTHATLAERTVARLAAGFAPYADALAAALAA
ETPDPLPLFDALNRFRVLCATRSGPRGVDQVNAVMAAQVRRSAGVTLAVGAQWFAGRPVM
VTRNDYALGLFNGDIGIALPGAGGALRVYFRTGDGGLRAVSPAALPPHDTAFALTVHKSQ
GSEFEHAVLMLPSAFSRVLSRELVYTAITRARERVEVIGSRAVLAQAIETPTQRDSGLAA
RIAEASGNA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggctcgaacacactggttcgacgccgccggaactcgatgacatcgacatcggc
gtgaatctgcctgcgccggccgatttcagcatcgcgctcgccgagggtttcgcgcgccgc
atcggcaccctggcgcggcgcggcggcgcgtcgggcgaggcggtgaaatgggcggcgcgg
ggcgcgttcgccgcgagccgcgcgacggccgaagggcacgtatgcgtgccgctcgcggtg
ctggcgcgacgcttcgaggcatcgggcgcggaggtgcgcgcggcgctgttcgcaagcggc
atggcgagcgacggttcgcagagcgccgcggcgttgcgtccgttggtggtcgatgggcaa
gggcggttgtatctggcgcgctactacgactacgagcggcggctagcgcgctcgctggtg
gcgcacgcgggtgcggcggcacagcgggtgcgcgaggaccaggcccggggtcgtgatcat
gttgcgggcggtggcgacgccgcgaccggcgcggatgcgagcgccgacgccagcgccaaa
acactgcacgagcgcctgctgcgttatttcggtccgccgaaggacgacgagctcgactgg
cagcgcgtcgcggccgtcatggcgctgtcaggatggctcaccatcgtcagcggcggaccg
ggcacgggcaagaccacgaccgtggtgggcgtgcttgcctgcttgctcgatgcgcgcgcc
gatctgcgaatcgcgctcgctgcgccgaccggcaaggcggcgcagcggatgcaggaagcc
ttgctcgcgcgcgccggcgaattgccacccgcgctcgccgcgcgcttgccgcagacttcg
tacacgctgcatcgtctgcttggctcgggaccgggggggcgtttccggcatcatcgcgac
aatccgttgccgtatgacgttgtggtgatcgacgaggcgtcgatgatcgacgtcgcgatg
gccgcgcatctgctcgatgcgatcgccccgcgcacgcgtctcgtgatgctcggagacaag
gatcagttggccgccgtcgaggccggcgcggtgttcgcggaactcagcgcgcgtccggac
ttcacgccagccgggatgcagcggatcgccgccgcgttgggtatcgaggaggcgcggctc
gcgcaagcattgccgcgtgcatcgcgaagcgtccacgagcagcgaggcggccggtccact
cgtgaagaagcgccggacgattttcatgcaccgtccgacgatctgttcgcgcgtgccgat
gcgccggatgctgtcgttgcgcgctccgatgatgatctgttcgaacacgccgtctcgtct
gcctacgcgtcggcgatgggatcggcggcatcaccgcttcaaagcccgctagccgactgt
gtcgtctggctcgagcgcaattatcgcttcggcctcgaatcgccgatcggccgcttgtcg
ctcgcgatccgcaacggctcggcgaacgcggcgctcgacgtcatgagcctcgatccgctc
gaaccgtgcgccgcggcgcttcacgaagatacccacgcgacgcttgccgagcgcacggtc
gcgcggctggccgcgggcttcgcgccgtatgcggacgcgctcgccgcggcgctcgccgcc
gaaacgccggacccgttgccgcttttcgatgcgttgaaccgcttccgcgtgttgtgcgcg
acgcgttcggggccgcgtggcgtcgatcaggtgaatgcggtcatggcggctcaagtgaga
cgctcggccggcgtgacgctcgccgtgggcgcgcaatggttcgcgggacggccggtgatg
gtcacgcgcaacgattacgcgctgggcctgttcaacggcgatatcggcatcgcgctgccg
ggcgcgggcggtgcgttgcgggtgtactttcgtaccggtgacggcggtctgcgggcggtc
tcgccggccgcgctcccgccgcacgacacggcgttcgcgctcacggtccacaagtcgcaa
ggctccgagttcgaacacgcggtgctgatgctgccgtcggcgttcagccgggtgttgtcg
cgcgaactcgtgtacacggcgatcacccgggcgcgcgagcgggtggaagtgatcggttcg
cgggccgtgctggcgcaggctatcgagacgccgacgcagcgtgactcggggctggccgca
agaatcgcggaggcgtcgggtaacgcgtag
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