Paraburkholderia terricola: CUJ90_11165
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Entry
CUJ90_11165 CDS
T05812
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pts
Paraburkholderia terricola
Pathway
pts03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CUJ90_11165 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pts03400
]
CUJ90_11165 (recB)
Enzymes [BR:
pts01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CUJ90_11165 (recB)
DNA repair and recombination proteins [BR:
pts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CUJ90_11165 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DUF374
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AXE92831
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All DBs
Position
mHS1_A:complement(2521739..2525443)
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AA seq
1234 aa
AA seq
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MNRALQHHALVAEELDVFACSLDGVNQIEASAGTGKTWNICALYVRLLLEKNLNADQILV
VTFTKAATAELHERIRGRLAELHRAIDLDDDGGDPFIQRLFETTLAPEGGIERDAALKVV
RRALRTFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDAALRFEMAADFWREQVEP
VAHAHPAFAAWLVAKRAGPASLDEQLARRLKKPLARLRWGKADPGASGADPQADFDAACE
VWCAERDAIVGLLAQAQERLSKTTHKPDHVSAAIAAWSEYFAQGDCHAPPPRAALKLTAS
ALKKATKVKFEPPEHAFFEHAEALAAAVVAAEAAQRARWLSLVQAWLDYAPAELAARKRT
RRVVSFDDLLSNLYRALAAHPWLADALRTRYPAALIDEFQDTDPLQFAIFSRIFAPAGPL
FLVGDPKQAIYSFRAADLHTYLAARAAASACYTLAVNQRSTAPIVEACNRLFEANPQAFV
LDGLDYQPVRAGERRRPPFSDPDASAGDFRIWSLPQGDAALTKREAQREASEACAAEIVR
LLRGAREGAVTIGGAPLAPGNIAVLVQTHKQGSLIKRVLAAWGVGSVELAQASVFATLDA
EQIERVLAAVDTPGDLRRLRAALATDWLGLDAAALWRLEQAADAPAPADDPAHAADAMGW
VERFSRYRMLWHERGFAVMWRTLMRELRVAQRLVAGADGERRLTNVNHLAELVQARAATQ
PGIAPTLRWLAAQRTQGGGEDAQLRLESDRNLVQIVTVHKSKGLEYAVVFCPFLNDGALR
EPPSSGLPDAREYHDETGDAVLHYGCDDEEAERAARHAVREQAAERARLVYVALTRAVYR
CYLVAGTYLSSRSTRESRRSVLNWLVGGSGHGFDDWLTDPPDEAALSASWQALAGGPITL
QALPKVARRVPLESIQDSGARMQARANRRPLRDQWRMASFSGLIAAGSKTEEMHAPVEEV
RPDHDEIADALVSAPPLVPVRAQQAPSYAEDDILAFPRGAAAGDCLHRMFELADFTKPQT
WPDAIRGALRERPAPAVPELATRLPAMMHKLIADVVTTELVPGMVLSKLDPRRRINELEF
LFAAPSLDFPALRELLIEHGYPDVALEPGVLRGFVKGFIDMIVEHDGRFWIVDWKSNHLG
DSAADYADAPLQAAMASHAYHLQALLYTVALHRYLKTRLRDYSYDTHIGGYLYLFVRGVR
PQWRDADGPAGVHGRRPPFELVALLDAAMIGGAA
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgcccttcagcatcacgcgctggttgccgaggaactcgacgtattcgcctgt
tcgctcgacggcgtcaaccagatcgaggcgtcggcgggaaccggcaagacctggaacatt
tgcgcgttgtacgtgcgcctgctgctcgaaaagaacctgaacgcggatcagattctcgtc
gtcacgttcaccaaggcggccaccgctgaattgcacgagcgcattcgcggccgtctcgct
gaactgcatcgggcaatcgacctggacgacgacggcggcgatccgttcatccagcgtctc
tttgaaacgacgctcgcgcccgaggggggcatcgagcgtgacgccgcgttgaaggtagtg
cgccgcgcattgcgcacattcgaccaggccgcgattcacacgatccatgcattctgtcag
cgcgcgttgcaggaggcgccgttcgccgccgccatgccgttcgccttcgaaatggaagcc
gacgacgcggcgttgcgcttcgagatggcggctgatttctggcgcgagcaggtcgagccg
gtggcccatgcgcatcccgcgttcgccgcctggctggtggcgaaacgcgcgggccccgct
tcactcgacgagcagcttgcgcgtcgtctgaagaagccgttggcgcggttgcgctggggc
aaggccgatccgggcgcaagcggcgccgatccgcaagccgatttcgatgcggcctgcgaa
gtctggtgtgcggagcgcgacgcgatcgtcggtctgctcgcgcaggcgcaagagcgtctc
agcaagaccacgcacaagccggatcacgtgagcgcggcgatcgccgcgtggagcgaatac
ttcgcgcagggcgattgtcatgcgccgccgccgcgggccgcgttgaagctgacggcgtcg
gcattgaagaaggccaccaaggtgaagttcgaaccgcccgagcacgcgttcttcgaacat
gccgaagcattggcggccgcggtggtcgcggccgaagccgcgcaacgcgcgcgttggctc
tcgctcgttcaggcctggctcgattacgcgccggccgaactggcggcgcgcaagcgcacg
cgccgcgtggtctcgttcgacgatctgctgtcgaacctctaccgcgcgcttgcggcgcac
ccctggcttgccgatgcattgcgcacgcgctatccggccgcgctgatcgacgagttccag
gacaccgatccgttgcagttcgcgatcttcagccgcatcttcgcgccggccgggccgctc
tttctcgtcggcgatccgaagcaggcgatctacagttttcgcgcggcggatctgcatacc
tatctggcggcgcgcgcggcggcttcggcgtgctacacgctcgcggtcaatcagcgctcc
accgcgccgatcgtcgaggcttgcaaccggctcttcgaagccaatccgcaggcgttcgtg
ctcgacggtctcgactatcagccggtgcgcgcgggcgagcgtcgcaggccgcctttctcc
gaccccgacgcgagcgccggcgacttccgcatctggagcctgccgcaaggcgacgccgca
ttgaccaagcgcgaggctcagcgcgaagcgagcgaagcgtgcgcggccgagatcgtgcgg
ctgttgcgcggcgcgcgtgaaggcgccgtgacgatcggcggcgcgccgcttgcaccgggc
aacatcgcggtgctggtgcaaacgcataaacagggcagtctgatcaaacgcgtgctggcg
gcgtggggcgtcggcagcgtggaactggcgcaggcctcggtgttcgcgacgctcgacgcg
gagcagatcgaacgcgtgctggccgcggtcgacacgcccggcgatctgcgccgcctgcgc
gccgcgctggcgaccgactggctcgggctcgacgccgccgcgttgtggcgtctcgaacag
gccgccgatgcgcccgcacccgccgacgaccccgcgcatgccgcggacgcgatgggctgg
gtcgagcgtttttcacgctaccggatgctgtggcacgagcgcggctttgccgtgatgtgg
cgcacgctgatgcgcgaactgcgcgtcgcgcaacggctggtcgccggagccgacggcgag
cgtcgtttgacgaacgtgaaccacctggccgaactcgtgcaggcgcgcgccgccacgcaa
cccggcatcgcgccgaccttgcgctggctcgccgcgcaacgcacgcaaggtggcggcgaa
gacgcgcagttgcggctcgaatcggatcgcaacctcgtgcagatcgttaccgttcacaaa
tcgaaggggctggaatatgcagtggtgttctgtccgttcctgaacgacggcgcgctgcgt
gagccgccgtcttccggcttgccggacgcgcgcgagtatcacgacgaaacgggcgacgcg
gtgctgcattacggttgcgacgacgaggaggccgagcgcgcggcgcgtcacgcggtgcgc
gaacaggcggcggagcgggcgcggctcgtctacgtcgcgttgacgcgcgctgtctaccgt
tgctatctggttgcgggcacgtatctgtcgtcgcgttccacccgggagtcgcgccgcagc
gtgttgaactggctggtgggcggcagcggtcacggctttgacgactggctcaccgatccg
cccgacgaagccgctttgtcggcaagctggcaggcgctggcgggcggtccgatcacgttg
caggcgttgccgaaagtggcgcgccgcgtaccgttggaaagcatccaggacagcggcgcg
cggatgcaggcgcgcgccaatcgccggcccttgcgcgatcagtggcgcatggcgagcttc
agcggtctgatcgccgcgggaagcaagaccgaggagatgcacgcgccggtggaagaagtg
cggcccgatcacgacgagatcgccgatgcgctcgtgtccgcgccgccgctcgtgccagtg
cgcgcgcagcaggcgccgtcttacgccgaggacgacattctcgcgtttccgcgcggcgcg
gcggcgggcgactgcctgcatcgcatgttcgaactggcggatttcaccaaaccgcaaacc
tggcccgacgcgattcgcggcgcgttgcgcgagcgcccggcgccggccgtgcccgaactc
gcaacgcgtctacccgcgatgatgcacaagctgatcgcggacgtcgtgaccaccgaactc
gtgcccggcatggtgctgtccaaactcgacccgcgccgccgaatcaatgaactggagttt
ctgttcgcggcgccgtcgctcgatttcccggcattgcgcgagttgctgatcgaacacggc
tatcccgacgtcgcgctggaacccggcgtgttgcgcggtttcgtcaagggattcatcgac
atgatcgtcgaacacgacggacgcttctggatcgtcgactggaaatcgaaccatctgggc
gacagtgccgccgactacgccgacgcgccgctccaggcggccatggcgagccatgcgtat
cacctgcaagcgctgctttatacggtcgcgctgcatcgttacctgaaaacgcggctgcgc
gactactcgtatgacacgcacattggcggctatctgtatctgttcgtgcgcggcgtgcgt
ccgcagtggcgcgatgccgacggcccggcgggcgtgcatgggcgcaggcccccattcgaa
ctggtcgcgctgctcgacgcggcgatgatcggaggtgccgcatga
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