Paraburkholderia terricola: CUJ90_15150
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Entry
CUJ90_15150 CDS
T05812
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pts
Paraburkholderia terricola
Pathway
pts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUJ90_15150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pts03019
]
CUJ90_15150
Enzymes [BR:
pts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CUJ90_15150
Messenger RNA biogenesis [BR:
pts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CUJ90_15150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Sacchrp_dh_NADP
HI1480
P-loop_SecA
CMS1
DegT_DnrJ_EryC1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AXE93506
UniProt:
A0A1M6P9K2
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All DBs
Position
mHS1_A:3390628..3392175
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AA seq
515 aa
AA seq
DB search
MSFDSLGLSEPLVRAVHELGYTTPTPIQTQAIPAVLNGGDLLAGAQTGTGKTAGFTLPIL
QRLNTMPGVATASGKRAVRALILTPTRELAAQVEESVRAYGKYLKLKSTVMFGGVGINPQ
IGALRSGVDIVVATPGRLLDHMQQKTIDLSHLEILVLDEADRMLDMGFIHDIKRVLAKLP
PKRQNLLFSATFSDEIKTLADNLLDSPALIEVARRNTTAETVAQKIHPVDRDKKRELLTH
LIKQHNWFQVLVFTRTKHGANRLAEQLTKDGISALAIHGNKSQSARTRALAEFKDGTLQV
LVATDIAARGIDIDQLPHVVNYDLPNVPEDYVHRIGRTGRAGATGEAISLVCVDELQLLK
DIEKLIKRAVPQEVIAGFEPDPTAKPEPILRRGQGGGGGGGRSPRQGQGAPKRDGASSAK
PAQRSGQRPANGQQQPRPQGAKPAGNGGQPRRDGQRQDDRPRAVAHEGNGAQHAPRKPQA
NKPQGGNPGALLGGTKQRNDAPRGGQPTRSGQRGR
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctcggcttgtccgaacccttggtccgcgctgtacacgaactcggc
tacaccacgccgactccgatccagacacaagcgattcccgccgtgctcaacggcggcgat
ctgctggccggcgcgcagaccggcaccggcaagaccgccggcttcacgctgccgatcctg
cagcgcctgaacaccatgccgggagtcgccacggcttcgggcaagcgcgcggtgcgcgcg
ctgatcctcacgcccacgcgcgagcttgcggcccaggtcgaagaaagcgtgcgcgcttac
ggcaagtacctgaagctgaagtcgaccgtgatgttcggcggcgtcggcatcaatccgcag
atcggcgcgttgaggagcggcgtcgatatcgtcgtggccacgccgggccgtctgctcgac
cacatgcagcagaaaaccatcgacctgtcgcatctagagattctcgtgctcgacgaggcc
gaccgcatgctcgacatgggcttcatccacgatatcaagcgcgtgctcgcgaagttgccg
cccaagcgtcagaacctgctgttctcggcgacgttctccgacgagatcaaaacgctcgcc
gacaacctgctcgactcgccggcgctgatcgaagtcgcacgccgcaatacgaccgccgag
acggtcgcgcaaaagattcacccggtggatcgcgacaagaagcgcgaactgctcacgcac
ctgatcaagcaacacaactggttccaggtgctggtgttcacgcgcaccaagcacggcgcg
aaccgcctcgccgagcagctcacgaaagacggcatcagcgcgctggcgattcacggcaac
aagagccagtcggctcgtacgcgcgcgctcgccgagttcaaggacggcacgctgcaggtg
ctggtcgccaccgacatcgccgcacgcggcatcgatatcgaccagttgccgcacgtggtc
aactacgatttgccgaacgtgccggaagactacgtgcaccgcatcggccgcacgggtcgc
gcgggcgcgacgggcgaagcgatttcgctggtgtgcgtcgacgaactgcaattgctgaag
gacatcgagaagctgatcaagcgcgcggtgccccaggaagtgatcgccggtttcgaaccg
gatccgactgcgaagccggagccgatcctgcgccgcggtcaaggcggtggcggtggcggc
ggacgttcgccgcgccagggccaaggtgcgccgaagcgcgatggcgcttcgtccgcgaaa
ccggcgcagcgctcgggtcagcgcccggcgaacggtcagcagcaaccgaggccgcaaggc
gcaaagccggccggcaacggcggccagccgcgccgcgacggtcagcgtcaagacgaccgg
ccgcgcgctgtcgcgcatgaaggcaacggcgcgcagcatgcgccgcgcaagccgcaggcc
aataaaccgcaaggcggcaaccccggcgctttgctcggcggcaccaagcagcgcaacgac
gcgccgcgcggcggccagccgacacgcagcggccagcgcggccggtaa
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