Paraburkholderia terricola: CUJ90_15635
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Entry
CUJ90_15635 CDS
T05812
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pts
Paraburkholderia terricola
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pts03016
]
CUJ90_15635
Enzymes [BR:
pts01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CUJ90_15635
Transfer RNA biogenesis [BR:
pts03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CUJ90_15635
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
TrAA12
Motif
Other DBs
NCBI-ProteinID:
AXE93591
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All DBs
Position
mHS1_A:complement(3491231..3493345)
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AA seq
704 aa
AA seq
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MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPSAAELMQQADAA
AQDIDLDFLWECAPDDEFPFAALGAEYFGESFGPIERAALVLRMHGAPVYFRRKGRGMYQ
RAPEEQLKMALAGLERKRQQALVQAGYEEELKAGRLPEAFTGSKALALLTRPDKNTIEYK
ALEGAAAARGISQARLMLECGGIASARALHEAKFLSEFFPHGTGFPPVQVGALPEDLPEA
DVEAFSIDDITTTEIDDAFSVEHLADGRVRIGVHIAAPALGIQRGDEVDAIARTRLSTVY
MPGDKITMLPDSVVEAFTLAEGGLRPALSLYVIVNRETQEIVASETRAERVFVKNNLRHN
TLDELVTEEALAAGTGDYPHKEDIAVLWPFAQALFEKRQTARAGYGLRREVQRNTDFNFY
VEGEHITITPRRRGSPLDTIVAELAILANSSWGAFLHDHGVPGIYRTQRAFGAPTGPKRT
RMQTSAAPHEGLGVTQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLF
AVVQGFDDTYTAYADHQRRMEYFWCLRWLKQENRKQVVASVVKGDLVRLEEIPLLLHVPG
LGVHARGTRLLMEVMSLDELTVEASVRLLHVLDAPTVTSGGEVEEADDGEDEIIDAADAS
AEGEAEAQAEANLDGDAAAQGDAGNGDGASDASADQQHVTEPGR
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgatgcgtttcaggtcgagttgccgggcggccggcgcgccaaggtgcgcgcgaaagac
gtgttgatcgaattcgacaagccgagcgcggccgaactgatgcagcaggccgacgccgcc
gcgcaggacatcgatctggatttcctgtgggaatgcgcgcctgacgacgaattcccgttc
gccgcgctcggcgcggagtatttcggcgaaagcttcggcccgatcgagcgcgcggcgctg
gtgctgcgcatgcacggcgcgcccgtgtacttccgccgcaagggccgcggcatgtatcag
cgcgcgcccgaggagcaactgaaaatggcgctcgccggccttgagcgcaagcgtcagcag
gcgctcgtgcaggcgggctacgaggaagaactgaaggccggccgtctgcccgaagcgttc
accggcagcaaggcgctcgcgttgcttacgcggcccgacaagaacacgatcgaatacaag
gcgctcgagggcgccgcggcggcgcgcggtatttcgcaggcgcgcctgatgctcgaatgc
ggcggcattgcgtcggcgcgcgcgctgcacgaggccaaatttctatcggagtttttcccg
cacggcaccggtttcccgccggtccaggtcggcgcgttgccggaggatttgccggaagcc
gacgtcgaggcgttctcgatcgacgacatcaccaccacggaaatcgacgacgcattctcc
gtcgagcatctggcggacggccgcgtgcggatcggcgtgcacatcgccgcgccggcgctc
ggcattcagcgcggcgacgaggtcgatgcgatcgcgcgcacgcgcttgtccaccgtctac
atgccgggcgacaagatcacgatgctgcccgacagcgtcgtcgaagcgtttacgctcgcc
gaaggcggcttgcggccggcgctttcgctgtatgtgatcgtcaatcgcgagacgcaggaa
atcgtcgcgagcgaaacgcgcgccgagcgcgtgttcgtgaagaacaacttgcgtcacaac
acgctcgacgaactcgtcaccgaagaggcgcttgccgccggcaccggcgactatccgcac
aaggaagacatcgccgtgctgtggccgttcgcgcaggcgctgttcgagaaacgacagacc
gcgcgcgccggttacggcctgcgccgcgaagtgcagcgcaataccgacttcaacttctac
gtggaaggcgagcacatcacgatcacgccgcgccggcgcggttcgccgctcgacacgatc
gtcgcggaactggcgattctcgccaactcgtcatggggcgcgtttttgcacgatcacggc
gtgcccggcatctatcgcacgcagcgcgcattcggcgcgccgaccggccccaagcgcacc
cgcatgcagacctcggccgcgccgcacgagggcctcggcgtcacgcaatacgcgtggagc
acctcgccgctgcgccgctacgtcgacctggtgaatcagtggcaactgatcgcctgcgtg
cagcatggcgtgaccgcgaagctggccgcgccgttcaagccgaaagacgccgatctgttc
gcggtcgtgcaaggtttcgacgacacctacaccgcgtacgccgatcaccagcgccgcatg
gagtacttctggtgcctgcgctggctgaagcaggagaacaggaagcaggtagtggcgtcg
gtggtgaagggcgatctggtgcgcctcgaggaaattccgctgctgctgcacgtgccgggc
ctcggcgtgcacgcacgcggcacgcgcttgctgatggaagtgatgtcgctcgacgaactg
accgtcgaagcgtccgtgcgtctgctgcatgtgctcgacgcgccgaccgtgacgagcggt
ggcgaggtcgaggaagcggatgacggcgaggacgaaatcatcgacgccgccgatgcaagc
gccgaaggcgaagccgaggcgcaagccgaagccaacctcgacggcgacgcggccgcgcag
ggcgacgccgggaacggcgatggcgcaagcgacgcgtcagccgaccagcagcacgtgacg
gagccgggacgatga
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