Paraburkholderia terricola: CUJ90_28040
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Entry
CUJ90_28040 CDS
T05812
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pts
Paraburkholderia terricola
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pts03000
]
CUJ90_28040
Transcription factors [BR:
pts03000
]
Prokaryotic type
Helix-turn-helix
Other families
CUJ90_28040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
Mg_chelatase
AAA_5
PAS_4
HTH_30
HTH_7
HTH_23
AAA_2
HTH_29
HTH_50
HTH_22
TrmB
HVO_A0261_N
HTH_AraC
HTH_Tnp_ISL3
HTH_26
HTH_20
HTH_17
Xre-like-HTH
HTH_28
Mga
AAA_3
HTH_11
DUF134
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AXE96084
LinkDB
All DBs
Position
mHS1_B:complement(2115978..2118095)
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AA seq
705 aa
AA seq
DB search
MSLLADSSLHVREVLNVVNHQLATRPTSEPVAQSWARCMNEFQLDPSRFVTPPILTEYEL
SERREALGDLIACSKLEMTTLYQQLADPELAVVLVDAGGVIVHQVSSVPFAEAVAPDGFR
VGALWSEREAGTNGMGTCLAERDCIAVCQHEHFYPRYTSLTCSAAPIFDDSGEIAGVLDV
TSRSKLLQQHSLVLVGMSRQMIENRLLDSRYRHANMIHFHSRPEFVGTLHGGKLAVADDS
TVLAANRSALFQLGFRSLSELRGRRIEEAFNASLEDMIARSIRGSFHPVTVYSANATNRF
FLVAQTPQNRAGRATRVALASPVPRAAPPEKRPPPARLDEIAHLEFGDPRMASQIQLAAR
VIQRKIPIVIRGQTGTGKEVFAQALHSISPHSAGPFVPVNCASLPENLIESELFGYRAGA
FTGAQREGRRGKIVQANTGTLFLDEIGDMPLALQARLLRVIEEHEVTPLGAETTVKVNFQ
LISASHRNLLELVHGGQFREDLYYRLKGVELNLPPLCERLDKLALIHHLLENESGDDEPP
ELTAEAEHALLTYAWPGNIRQLRHVLQMAIALSDGQPIRCVDLPVEITQRAPSVGMPSAP
NVAAAEFEAHLTDDADLSALNAIQLNERETVLSLLDEHRWNVSNVAKALGISRNTLYRKM
RRLHIRLSHDGTPLDGAPPDGSPDGSPDDPSDGMPYNGSSPAAAA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgcttgctgatagcagtctgcacgtccgagaagttctgaacgtagtcaatcat
caattggcgacgcgtccaacgagcgaacccgtcgctcaatcgtgggcgcgctgcatgaac
gagtttcagctcgacccttcacgctttgtcacgcccccgattctcaccgagtacgaactg
agtgaacgccgcgaggcgctcggcgatctgatcgcgtgctcgaagctcgagatgaccacg
ctctatcagcaactggccgatcccgaactcgcggtggtcctcgtcgacgccggcggcgtg
atcgtccatcaggtttcgtcggtgccgttcgccgaagcggtcgcgcccgacggctttcgc
gtgggcgccctgtggagcgagcgcgaggcgggcaccaacggcatgggcacctgtctcgcc
gaacgcgactgcatcgccgtctgtcagcacgagcatttctatccgcgctatacgtcgctc
acctgctcggccgcgccgatcttcgacgatagcggcgagattgccggcgtgctcgacgtg
acgagccgctccaagctgttgcagcagcactcgctggtgctggtgggcatgtcgcggcaa
atgatcgaaaaccgcttgctggactcgcgttaccggcatgccaacatgattcacttccat
agccgcccggaattcgtcggcacgctgcacggcggcaagctcgccgtcgcggacgacagc
accgtgctcgccgcgaaccgcagcgcgctgttccagctcggctttcgcagcttgagcgaa
ttgcgcggacggcgcatcgaggaagccttcaacgcctcgctcgaagacatgatcgcgcgc
agcattcgcggctcgttccatccggtcaccgtctacagcgcgaacgcgaccaaccgtttc
tttctcgtcgcgcagacgccgcagaaccgcgccgggcgcgccactcgcgtggcgctcgcc
agtcccgtgccgcgtgccgcgccgcccgaaaagcgcccgccgcccgcccggctcgacgaa
atcgcgcatctggaattcggcgacccgcgcatggcctcgcaaatccagcttgccgcgcgc
gtgattcagcgcaagatcccgatcgtgatcaggggccaaacgggcaccggcaaggaagtg
ttcgcccaggcgctgcacagcatcagcccgcactcggccggcccgttcgtgccggtgaat
tgcgcgtcgttgccggagaatctgatcgaaagcgagttgttcggctatcgcgccggcgcg
tttaccggcgcgcagcgcgaagggcgtcgcggcaagatcgtgcaggccaataccggcacg
ctgtttctcgatgaaatcggcgacatgccgctcgcgttgcaagcgcggctcttgcgcgtg
atcgaggaacacgaggtgacgccgctcggcgcggaaacgaccgtcaaggtcaattttcag
ctcatcagcgcgagtcaccgcaatctgctcgaactcgtgcatggcgggcagttccgcgag
gatctgtattaccggctcaagggcgtcgaactgaacctgccgccgctttgcgagcggctc
gacaaactcgcgctgatccaccatctgctggaaaacgaatccggcgacgacgaaccgccc
gagttgaccgccgaggccgaacacgcgctcctgacctatgcgtggcccggcaacattcgc
cagttgcggcacgtgttgcaaatggcgatcgcgctcagtgacggacaaccgatccgctgc
gtggacctgcccgtcgaaatcacgcagcgcgcgccgagcgtcggcatgccgtcggcgccg
aacgttgccgccgcggagttcgaagcgcatctgaccgacgacgcggacctctccgcgctc
aacgcgatccagttgaacgagcgcgaaaccgtgctgtcgctgctcgacgagcaccgctgg
aacgtcagcaacgtcgcgaaggcgcttggcatcagccgcaacaccctgtaccggaagatg
cgccggctgcatatccggctgtcgcacgacggcacgccgctcgatggcgcgccgcccgac
gggtcgcccgacgggtcgcccgacgatccgtccgatggcatgccgtacaacggatcgtcg
cccgccgctgccgcatga
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