Paraburkholderia terricola: CUJ90_29905
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Entry
CUJ90_29905 CDS
T05812
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pts
Paraburkholderia terricola
Brite
KEGG Orthology (KO) [BR:
pts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pts03032
]
CUJ90_29905
03400 DNA repair and recombination proteins [BR:
pts03400
]
CUJ90_29905
Enzymes [BR:
pts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CUJ90_29905
DNA replication proteins [BR:
pts03032
]
Prokaryotic type
DNA Topoisomerases
CUJ90_29905
DNA repair and recombination proteins [BR:
pts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CUJ90_29905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
AXE96390
UniProt:
A0A1M6RDI0
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Position
mHS1_B:complement(2509024..2510319)
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AA seq
431 aa
AA seq
DB search
MAATIKPLQRPPERERAADSARQATAAAMPPGLRHADDSRPGYTRQREKDGFAYFDVDGQ
RIEDEDEIQRINALAIPPAYENVWICPDPRGHLQATGRDARGRKQYRYHPRWRETRDADK
YERLAEFGRALPRIRARVARDLKRPGMPSDKVIAAIVQLLDTTLIRIGSVEYARENQSYG
LTTLRKKHVKIEAGHLRFKFRGKSGIEHEVTVNNPRVKRIVRRCAELPGHDLFQYLDEDG
TRRTVGSTDINDYLRRASGADFTAKDYRTWAGSVYAMAALRRLVCSSAAEARRHLVATVK
DVADLLRNTPSVCRRCYIHPAVISAFEADELRCLPEGKTRRGLKVDEAAFAALLARAEKR
AAKRARQSGAKGRKAREAEVADSVNGSLTALLKKSRVARKRKDAGASPGAKAHQASSSNA
AITSHTSRSPS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaccatcaagccgttgcaacgaccccccgagcgcgaacgcgccgccgacagc
gcgcggcaagcgacggcggccgccatgccgccgggcttgcggcacgcggacgacagccgg
cccggctatacgcgccagcgtgaaaaggacggcttcgcgtatttcgacgtcgacggccaa
cgcatcgaggacgaagacgaaatccaacgcatcaatgcgctcgcgattccaccggcttac
gagaacgtgtggatttgtcccgacccgcgcggccatctccaggcgaccgggcgcgacgca
cgcggacgcaagcagtatcgctatcacccgcgctggcgcgagacgcgcgatgccgacaaa
tacgagcgcctggccgagttcggccgcgcgttgccgcgcatccgcgcgcgcgtcgcacgc
gatctgaaacgccccggcatgccgagcgacaaggtcatcgccgcgatcgtgcagttgctc
gacacgacgctgattcgcatcggcagcgtggagtacgcgcgcgagaaccagtcgtacggt
ttgacgacgctgcgtaaaaagcacgtgaagatcgaggcaggccacttgcgcttcaagttt
cgcggcaagagcggcatcgaacacgaggtcacggtgaacaatccgcgcgtcaagcgcatc
gttcggcgctgcgccgaactgcccggacacgacctgttccagtatctcgacgaggacggc
acgcgccgcacggtaggctcgaccgatatcaacgactatctgcgccgcgcgagcggcgcg
gacttcaccgcgaaggactatcgaacgtgggccggcagcgtctacgcgatggccgcgctg
cgacggctggtatgcagcagcgcggcggaagcgcgccgccacctcgtcgccaccgtcaag
gacgtcgcggacttgctgcgcaacacgccgtccgtatgccggcgctgctacattcacccg
gccgtgatcagcgcgttcgaagccgacgaattgcgctgcttgccggagggcaagacgcgc
cggggattgaaagtggatgaagcggcgttcgccgcattgctcgcgcgggcggagaagcgc
gcggcgaaacgggcgcgtcagtcgggcgcgaaaggccgcaaggcgcgcgaggcggaagtg
gccgacagcgtcaacggttcgctcaccgcgttgctgaagaagtcgcgcgtggcgcgcaag
cgtaaagacgccggcgcttcacccggcgcgaaagcgcatcaagcctcttcttcgaacgcg
gccatcacgagccacacgtcgcgctcgccatcgtga
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