Photorhabdus thracensis: VY86_01920
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Entry
VY86_01920 CDS
T03944
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptt
Photorhabdus thracensis
Pathway
ptt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VY86_01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptt03400
]
VY86_01920
Enzymes [BR:
ptt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VY86_01920
DNA repair and recombination proteins [BR:
ptt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VY86_01920
Prokaryotic type
VY86_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKH62287
UniProt:
A0A0F7LKC6
LinkDB
All DBs
Position
complement(518725..519405)
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AA seq
226 aa
AA seq
DB search
MSASLTWHDVIGNEKKQPYFLDTLAYVAKERQAGKTIYPPQQDVFNAFRYTELADIKVVI
LGQDPYHGPNQAHGLSFSVQPGIPAPPSLVNMYKELVSDIPGFQCPNHGCLISWAKQGVL
LLNTVLTVERGNAHSHANLGWETFTDKVIAAINEHRSGVVFLLWGSHAQKKGNFIDANKH
HVLKAPHPSPLSAHRGFFGCKHFSKVNELLEKQGMAPINWTPELLQ
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcatctctcacatggcacgacgtgatcggtaacgagaaaaaacaaccttacttt
ctcgacacactggcttatgtcgctaaagagcgtcaggcaggtaaaaccatttatccgccg
caacaggatgtatttaatgcattccgctacaccgaattggctgatattaaagttgtgata
cttgggcaagatccttaccacggccctaatcaggcacatggcctctctttctcagttcaa
cctggtattcctgctccaccttcactggtcaatatgtacaaagagctggtatccgatata
cctggcttccaatgcccaaatcacggctgcctcatcagttgggccaaacaaggggtgctc
ctgctcaataccgtattaaccgtagaacgtggtaacgctcactctcacgcaaatctgggc
tgggaaactttcactgataaagtcattgctgcgattaacgagcaccgttcaggcgtagtt
tttcttctttggggatctcacgctcagaaaaaaggcaactttattgatgccaataaacac
catgtcctcaaagcacctcatccatctccgctgtctgcccacagaggattctttggttgt
aaacacttttcaaaagtcaatgaattactggaaaaacaaggaatggcgccaattaactgg
acacctgagttgctacagtaa
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