Photorhabdus thracensis: VY86_03535
Help
Entry
VY86_03535 CDS
T03944
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
ptt
Photorhabdus thracensis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptt03021
]
VY86_03535
Transcription machinery [BR:
ptt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VY86_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AKH62547
UniProt:
A0A0F7LL62
LinkDB
All DBs
Position
complement(860981..861979)
Genome browser
AA seq
332 aa
AA seq
DB search
MSQNTLKVNELYDDADLDESGIETDDFNEKLLKNGEDDLTDLENDLDVLQGMNQRVLDAT
QLYLGEIGFSPLLTAEEEVFFARRALRGDVLARQRMIESNLRLVVKISRRYSNRGLALLD
LIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVY
LRTARELAHKLDHEPSPEEIAEQLDKPVDDVSRMLRLNERIISVDTPISSDSDKALLDVL
SDENESGPEGTTQEDDMKKSIVKWLFELNSKQREVLARRFGLLGYEAETLEDVGKEIGLT
RERVRQIQVEGLRRLKDIMQTQGLNIEALFRT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaatacgctgaaagttaacgagttgtatgatgatgcggatttagatgaaagt
ggtattgaaactgacgacttcaatgagaaattattgaagaatggtgaggatgacctgact
gatcttgagaatgatttagatgtattgcagggtatgaaccagcgggttcttgatgcgaca
cagctttatctcggcgagattggtttttctcctttgttaaccgcggaagaagaggttttt
ttcgccaggcgggcattacgtggtgatgttctggcccgccagagaatgatcgagagtaac
ctgcggttggttgttaaaatttcccgtcgttacagcaacagggggttagcgcttcttgat
ttgattgaagaaggcaatcttggtcttatccgtgctgttgaaaaatttgacccggagcgt
gggttcaggttttctacctatgcgacatggtggattcggcaaactattgaacgggcgatt
atgaatcaaacccgtaccattcggttgccaatccatattgttaaagaacttaatgtctac
ttgcgtacagcaagagaacttgcccataaattggatcatgaacctagcccagaagagata
gcagagcaactggataaaccggttgatgatgtaagccgtatgctgcgattgaatgaacgt
atcatttcggttgatacacccattagcagcgattccgataaagcgctattggatgtttta
tcggatgagaatgaaagcggaccggagggaacaacacaggaagacgatatgaaaaagagt
atcgtcaaatggctgtttgagttgaattcgaaacaacgtgaagtattagcgcgtcgtttt
ggtcttttggggtatgaggctgaaacgctggaagatgtaggaaaagagatcggcttaaca
agggaaagagtgcgtcagatccaagttgaaggtttgcggcgtttgaaagatattatgcaa
acccagggtttgaatattgaagccttgttccgtacttag
DBGET
integrated database retrieval system
