Photorhabdus thracensis: VY86_05310
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Entry
VY86_05310 CDS
T03944
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ptt
Photorhabdus thracensis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptt03400
]
VY86_05310
DNA repair and recombination proteins [BR:
ptt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VY86_05310
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
RecA
GvpD_P-loop
Rad51
AAA_22
AAA_14
SLFN-g3_helicase
ABC_tran
AAA_16
DUF7125
nSTAND3
AAA
AAA_24
NTPase_1
cobW
AAA_29
Herpes_Helicase
Zeta_toxin
DZR
Zn_ribbon_Thio2
Viral_helicase1
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
AKH62837
UniProt:
A0A0F7LLY6
LinkDB
All DBs
Position
1346748..1348130
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AA seq
460 aa
AA seq
DB search
MAKAAKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAAAPSSRNDRFSGYAGDAGVS
RVQKLSEISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTMCQLSA
QMKTLYVTGEESLQQVAMRAHRLGLPVDNLNMLSETSIEQICLIAGQEQPKLMVIDSIQV
MHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSV
MLDGEADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEITAGSSVM
VVWEGTRPLLVEIQALVDHSMMTNPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFVN
VVGGVKVAETSADLALLLSLVSSFRDRPLPRDLVVFGEVGLAGEIRPVPSGQERISEAAK
HGFKRAIVPYANMPKKELPGMKVFGVKKLPDALSVMEDLD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaagcagcaaaacgggcgtttgtctgtaatgagtgtggggcggattatccgcgc
tggcaggggcaatgtagtgcatgtcatgcctggaataccattactgaggtgcgtttagcc
gcagcaccttcctctcgtaatgacaggttcagtggttatgcaggagatgctggtgtcagc
agggttcagaaattatcagagattagtctggaagagcttccccgtttttccactggattt
aaagagttcgatcgggttcttggcggtggtgttgtacccggtagcgcgattctgattggc
gggaatcccggcgcagggaaaagtaccttattgttgcagacgatgtgtcagctgtccgca
cagatgaaaaccttatatgtcaccggagaggagtcattacagcaggttgcgatgcgtgcg
caccggttggggttgccggttgataatctgaatatgctgtcagaaacaagtattgagcag
atttgtctgattgcggggcaggagcagccaaaactgatggtgattgactccatccaggtg
atgcatatggcggatattcaatcttctccggggagtgtcgctcaggtcagagaaaccgcc
gcttatcttacccggtttgccaaaacccgcggtgttgccattgttatggtaggccatgta
accaaggatggctcgctggcggggccgaaggtgttggaacactgtattgactgttcagtg
atgcttgacggagaagctgattcccgctttcgtactttacgcagtcataaaaaccgtttt
ggtgctgtcaatgagcttggggtgttcgctatgacagagcagggattgcgcgaagtcagt
aacccatcagcgattttccttagccgtggtgatgaaatcactgcgggtagctccgtcatg
gtggtgtgggagggaacccgtcctctactggtggagattcaagcgctggtggaccattcg
atgatgaccaatccacggcgggtggcggtgggtttggagcaaaaccggttggctattttg
ttggcggttcttcatcgtcacggtggcttgcaaatgtccgatcaggatgtgtttgtcaat
gtggttggtggggttaaggtcgcggaaaccagcgcggatctcgctttacttctctcttta
gtctccagttttcgcgatcggcctctgccgcgtgatttggttgtatttggtgaggtgggg
ttggccggtgaaatccgtcctgtacccagtgggcaggaaaggatatcagaagcggctaaa
catggtttcaaacgggcgatagtgccttatgccaatatgccgaaaaaagagctgccgggg
atgaaagtttttggtgtgaaaaagctgccagatgcgttatctgttatggaagatcttgat
taa
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