Photorhabdus thracensis: VY86_05705
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Entry
VY86_05705 CDS
T03944
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ptt
Photorhabdus thracensis
Pathway
ptt00730
Thiamine metabolism
ptt01100
Metabolic pathways
ptt01240
Biosynthesis of cofactors
Module
ptt_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VY86_05705
Enzymes [BR:
ptt01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VY86_05705
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AKH62896
UniProt:
A0A0F7LLZ7
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Position
1437591..1439519
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AA seq
642 aa
AA seq
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MSNNIVIPATDISPKPSPARPRKAQRDAAQEFINSIQGVSFPNSRRIYLQGSRDDIQVPM
REIQLSPTLIGGTKEKPQYEENEAIPVYDTSGAYGDPDSMLDVHVGLTKLRRQWIDERQD
TEPVTTLSSDFTQQRLADAGLDHLRFNNRPHPLKANKGKRVTQLHYARKGIITPEMEFIA
LRENMGRERIRGDVLRQQHAGQGFGAQLPENITPEFVRQEVAAGRAIIPANINHPESEPM
IIGRNFLVKVNANIGNSSVTSSIEEEVEKLIWSTRWGADTVMDLSTGRYIHETREWILRN
SPVPIGTVPIYQALEKVNGVAENLTWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAK
RLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSIQDAND
EAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLT
TDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKDDVKQGLITYKIAAHAADL
AKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPDTARTYHDETLPQASGKIAHFCSMCGP
KFCSMKISQEVRDYAAGMEQMSEEFRARGSELYHSAEGVSHE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataatattgttatccctgcaactgatatttcgccaaaacccagcccggcacgt
ccacgtaaagctcaacgtgatgccgctcaggaatttattaattctattcagggagtctca
ttccctaactcacgacgaatttatctccaaggctcacgtgacgatatccaagtcccaatg
cgggaaattcagttatcacctactttgatcggcggaactaaagaaaaacctcaatatgag
gaaaacgaagctatccctgtttatgatacttccggcgcttatggcgatcctgattccatg
ctagatgtgcatgttgggttaactaaactgcgccggcaatggatcgacgaacgtcaagat
acagaacccgttactaccctcagctctgattttactcagcaacgtctggcggatgctggc
ctcgatcatttacgtttcaataaccgccctcatccattaaaagccaataaaggcaaacgc
gtgactcaattgcactatgcccgtaaaggcatcatcacgccggaaatggaatttattgca
ctacgggaaaatatggggcgtgaacgtatccgcggtgatgtgttacgccaacaacatgcc
ggacaaggcttcggcgctcagttgccagaaaatatcacaccagaatttgtccgtcaggaa
gtcgcggcgggtcgggcaattattccggccaatatcaatcatcctgaatcagagccgatg
attattggtcgtaattttctggtgaaagttaacgccaatatcggtaactcttccgtcact
tcttccattgaagaggaagtggaaaagctaatctggtctacccgctggggagcggatacg
gtaatggatctctctactggccgttatatccacgaaacccgcgaatggatcttacgtaac
agcccggttcctatcggtaccgtccccatttatcaggccctggaaaaagttaatggtgta
gcggaaaacctcacttgggaaatgttccgtgataccttgctggaacaagcggaacaaggg
gtggattacttcactattcacgcaggcgttctgctgcgctatgtaccgatgacagccaaa
cgcctcactgggattgtctcccgcggtggctcaattatggcgaaatggtgtctgtctcat
catcaggaaaacttcctctaccaacatttccgcgagatttgtgaaatctgtgccgcttat
gatgtttccctatcattaggggatggcctgcgccccggttctattcaagatgccaatgat
gaagcccagtttgcagaactgcacacattaggcgaactgaccaaaattgcttgggaatat
gatgttcaggtgatgatcgaaggccccggacatgtgcccatgcagatgattcgccgcaat
atgacagaagaattggagcactgccacgaagcccctttctatacccttggcccactgacg
acagatattgcgccaggttatgaccatttcacttcgggtattggtgccgcaatgattggc
tggtttggttgcgctatgctctgttatgtgacgccgaaagaacatcttggtctgccaaac
aaagatgatgttaagcaagggctgatcacttacaaaattgctgctcatgccgccgatctc
gccaaaggccatccaggcgcacaaatccgtgataacgctatgtcaaaagcaagattcgaa
ttccgttgggaagatcagtttaatttggcgctcgatcccgataccgcacgaacctatcac
gatgaaactctgccacaagcctccggcaaaattgcgcatttctgttctatgtgcgggcct
aaattctgctcaatgaagatctctcaggaagtacgcgattatgccgccggtatggaacag
atgtcagaagaattccgcgcccgcggtagcgagctgtatcacagtgcggagggcgtatct
catgagtaa
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