KEGG   Photorhabdus thracensis: VY86_06475
Entry
VY86_06475        CDS       T03944                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
ptt  Photorhabdus thracensis
Pathway
ptt00300  Lysine biosynthesis
ptt00470  D-Amino acid metabolism
ptt01100  Metabolic pathways
ptt01110  Biosynthesis of secondary metabolites
ptt01120  Microbial metabolism in diverse environments
ptt01230  Biosynthesis of amino acids
Module
ptt_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:ptt00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    VY86_06475 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VY86_06475 (dapF)
Enzymes [BR:ptt01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     VY86_06475 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: AKH63027
UniProt: A0A0F7LMJ2
LinkDB
Position
complement(1598687..1599511)
AA seq 274 aa
MQFSKMHGLGNDFMVVDAVTQNVYFSPELICRLADRHTGVGFDQLLVVEAPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLINKRDIKVSTQSGRMVLSITNDDQVCVNMGE
PEFEPHLVPFRALKAEKTYILRVVERTVLCGVISMGNPHCVIQVADVETAEVEILGPALE
SHERFPERANIGFMQILNRGHICLRVYERGVGETQACGSGACAAVAVGIQQQLLDSHVQV
DLPGGSLFICWEGPGKPLYMTGPATHVYDGTIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttctccaaaatgcatggtcttggtaatgactttatggtcgttgatgctgtgacc
caaaatgtttatttctcaccagaactgatctgccgtttggctgacaggcatactggtgtg
ggcttcgatcagctgttagttgttgaagcaccttatgatccggatttggattttcactat
cgcatttttaatgctgatggcagtgaagtggcacagtgtggcaatggggcgcgttgtttt
gcccgttttgtccgccttaagggattgattaataagcgtgatattaaagttagtactcag
tcgggacgtatggtattgagtattaccaatgatgatcaggtttgcgtgaatatgggggaa
cctgaatttgagccacatcttgtgccatttcgcgcgttaaaggcagaaaaaacctatatt
ttaagagtggtagaaagaacggttctttgtggtgtgatttccatggggaatcctcattgt
gtgattcaggtggcagatgtggaaactgctgaagtggaaattctggggccagctctggaa
agccatgaaagatttcctgaacgggctaatattggtttcatgcaaattttaaaccgtggt
catatttgcttacgggtttatgaacgtggtgttggggaaactcaggcttgtggcagtggt
gcttgtgcagcggtagccgtcggcattcaacagcaactgctcgacagtcatgttcaggta
gacttgccgggaggttcactgtttatctgttgggaagggccgggcaaacctctctatatg
actgggccggcgacgcatgtttatgatggcacaattcatctgtaa

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