Photorhabdus thracensis: VY86_07750
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Entry
VY86_07750 CDS
T03944
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ptt
Photorhabdus thracensis
Pathway
ptt00540
Lipopolysaccharide biosynthesis
ptt01100
Metabolic pathways
ptt01250
Biosynthesis of nucleotide sugars
Module
ptt_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VY86_07750 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ptt01005
]
VY86_07750 (rfaD)
Enzymes [BR:
ptt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VY86_07750 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
ptt01005
]
Core region
VY86_07750 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
adh_short
Ldh_1_N
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AKH63247
UniProt:
A0A0F7LN52
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All DBs
Position
1839441..1840379
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AA seq
312 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDEGYKDILVVDNLKDGTKFANLADLDIADYMDKEEFIVSI
LAGDDLGDIDAVFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERGIPFLYASSAATY
GGRSDNFIEERQYEKPLNVYGYSKFLFDQYVRELLPHADSQICGFRYFNVYGPREGHKGS
MASVAFHLNNQINQGQNPKLFAGSEGFQRDFIYVGDAAAVNLWFWKNGVSGIYNCGTGRA
ESFQAVADAVVEFHKDKSPTVEYIDFPENLKGRYQSFTQADMTKLRAAGYDKPFKTVAEG
VAEYMHWLNQDK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgtcactggcggtgctggatttattggcagcaatattgtcaaagcactaaat
gacgaaggatataaagatattctggtcgtagataatctgaaagatggtactaagttcgcc
aatctggctgacctggatattgctgattacatggacaaggaagagtttattgttagtatc
ctggccggtgatgatttaggtgatattgacgctgttttccatgaaggcgcctgctcatcc
acaaccgagtgggatggtaagtatatgatggataataactatcaatattcaaaagaattg
ctgcactattgccttgaacgtggaattcctttcttgtacgcctcttccgcagcaacctat
ggtggccgcagtgataattttattgaggagcgtcaatatgaaaaacctctcaatgtttac
ggctactctaagttcctgttcgaccagtatgtccgggagctcttgcctcacgctgattca
cagatttgtggtttccgttatttcaatgtgtacggaccacgcgaagggcacaaaggcagt
atggccagtgttgcattccatctgaacaatcaaatcaatcaggggcaaaaccccaaacta
tttgctggcagtgaaggctttcaacgtgattttatctatgttggtgatgccgctgcggtt
aatctgtggttctggaaaaacggcgtttccggtatttataactgtggaacaggccgcgct
gaatctttccaggcggttgccgatgcggttgttgaatttcataaagataaatcacccact
gttgaatacattgatttccctgaaaatttaaaaggtcgttatcagagctttactcaagcg
gatatgactaaacttcgtgcggctggttatgataaaccattcaaaacagtcgccgaagga
gtagcggaatatatgcattggcttaatcaggataaataa
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