Photorhabdus thracensis: VY86_07910
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Entry
VY86_07910 CDS
T03944
Name
(GenBank) selenocysteinyl-tRNA-specific translation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
ptt
Photorhabdus thracensis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ptt03012
]
VY86_07910
Translation factors [BR:
ptt03012
]
Eukaryotic type
Elongation factors
VY86_07910
Prokaryotic type
VY86_07910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
WHD_2nd_SelB_bact
GTP_EFTU
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
FeoB_N
SRPRB
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
AKH63277
UniProt:
A0A0F7LN77
LinkDB
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Position
complement(1872323..1874182)
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AA seq
619 aa
AA seq
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MIFATAGHVDHGKTTLIQAITGVNTAHLPEEKKRGMTIDLGYAYWPQSDGSSIGFVDVPG
HEKFLANMLAGVGGIDHVLLVVACDDGVMAQTREHLVILRLIGCPVVIVALTKTDRVEPQ
RIIDVRQQIEYELVTQGWIGSPLFVTAATEEESVVPLRQHLLQLHQQNKQHEKLHQRFRL
AIDRAFSVKGVGLVVTGTALAGQVSAGDILWLTGSDKQIRVRGLHAQNQQTSMAQAGQRI
ALNIIGDVSKEQVSRGDWLLSQKPFENVERVLVEVETDEPLRNWQSLHIHHAASHITGRI
SLLNQPSDTPRLAELVLDSPLWLVEHDRLILRDISARKTLAGARVINLNSPRRGKRQPEF
LHWLTQLAKTSDHAANLTLHLLRGALSLSHFSWARQLTEADLHQLLADMDVIIADGMVLS
QSNARLAEQKLLQVLAKYHQQHADQLGLGRARLKRMALPALNEALVYTLIDLLLRDGQLK
QSHGWLYLPEQGLAFSDEQAKLWQRVAPYFTDDPWWVRDLASDLKEEEATIRSLLKKSAQ
LGHITAIVPDRYYCSQRIQQFAELIRKFNQNHGAITAADFRDELGIGRKLAIQILEFFDH
SGFTRRQAESHILRDNGLF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgccacagcaggtcatgttgaccatggtaaaaccacactgattcaagctatt
accggtgttaatacggcacatttgccggaagagaaaaaacggggtatgaccatcgatctc
ggttatgcctattggccgcagtcggatggatcttcgattggttttgtggatgtgcctgga
catgagaaattcctcgccaatatgctggctggggtcggtggtatcgatcatgttttgtta
gtggtcgcctgtgatgatggggtaatggctcagactagagaacatttagttattctgcgt
ttgattggctgcccggtggtgatcgttgcgctcactaaaacagatcgggtggaaccgcaa
cgaataattgacgttcgccaacagattgaatatgagctggtaactcaaggttggattggt
tcccctctgtttgtcacggctgccactgaggaagaaagtgttgtccctctgaggcaacat
ctgttgcagttacatcagcaaaataagcagcatgaaaaattacatcagcgttttcgtttg
gcaatcgatcgcgctttcagtgtaaaaggcgtgggtctggtggtgacgggaacggcattg
gccggccaggttagtgcaggagatattctctggctgaccggtagtgataaacaaatcaga
gtgcgtggcctgcacgctcagaatcaacagacaagtatggctcaggccgggcagcgtatt
gcactgaatatcatcggtgatgtgagtaaagaacaggtttctcgcggtgactggctactt
tcccaaaaaccttttgaaaatgtggagagggtactggtggaagtggaaactgatgaacct
ttgcgaaattggcaatctctgcatattcatcatgccgctagccatataacgggtcggatt
tcattactgaatcagccttctgatacgcctcgtctggctgaattagtgcttgatagccca
ttatggttggttgagcatgaccggctgatattgcgtgatatcagtgccagaaaaacactt
gctggggcacgggtgataaacctcaattctccccgccgtggtaagcgccagccagaattt
ttgcattggctcacccagcttgccaaaacatcggaccatgcggctaacttaacactccat
ttgctgcgaggtgcactttctctcagccatttttcctgggcgcgccagttaacggaagcg
gatctccatcagttactggctgatatggatgtgattattgccgatggtatggtgttatca
cagagcaatgccagattggcggaacagaaattgttacaggttttggctaaataccaccag
caacatgctgatcaactgggtttgggaagggctcgtctgaaacggatggcgctgccagcg
ctgaatgaagcgctggtttatactctgatagatctcttgctcagggatgggcaattaaaa
cagtcacatggttggttatatcttcctgagcagggtttggctttcagtgatgaacaggca
aaactgtggcaacgagtagccccctattttacagatgatccctggtgggtacgtgacttg
gcttctgatttaaaggaagaagaggcgacaattcgcagtttgttgaaaaaatcagctcaa
ttgggacatattaccgccattgttccggatcgctattactgtagccaacgaattcagcag
ttcgcggaacttatccgcaagtttaatcaaaatcatggtgcgattactgccgccgatttt
cgtgatgaattaggtattggccgtaaattggctattcagatcctggaattctttgatcac
agtggttttacccgccgtcaggctgaatcacatattcttagggataatggattgttctga
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