Photorhabdus thracensis: VY86_10365
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Entry
VY86_10365 CDS
T03944
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptt
Photorhabdus thracensis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptt03016
]
VY86_10365 (truB)
Enzymes [BR:
ptt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VY86_10365 (truB)
Transfer RNA biogenesis [BR:
ptt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VY86_10365 (truB)
Prokaryotic type
VY86_10365 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AKH63678
UniProt:
A0A0F7LNR3
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All DBs
Position
2399059..2400006
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AA seq
315 aa
AA seq
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MGRRRRGRDIHGVLLLDKPQDISSNDALQKVKRIFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQFLLDSDKRYRVIARLGRRTDTSDSHGQIISERAIRLNQAQLNEALAKFRGDTMQ
IPSMYSALKHQGKPLYEYARQGIEVEREARPITVYELQFIRWEDDELELEIHCSKGTYIR
TIIDDLGELLGCGAHVIYLRRLQVANYPNDRMVTLEQLYELQKQAEDREIPLGELIDPLL
LPMDSAVAHFPEVNLLPVVAAYFKQGQAVRSAKSLALVESMVRVTEGDERKFIGIAVIND
DGLVAPRRLVVENRD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcgtcgtcgtggtcgtgatatacatggcgtgttgttactggataagccgcag
gatatttcttctaatgatgcgctgcaaaaagtaaaacgtattttcaacgccaataaagct
ggtcacactggcgcgttggatccgttggcgacgggtatgctgccggtttgtctcggtgaa
gctacgaagttttcccagttcttacttgattctgataagcgttatcgggtgatagcccgt
cttggtcggcgtactgacacatctgattcacacggacagatcatcagtgaaagagcaatc
cggctaaatcaggctcagcttaatgaagctttggctaaattccgtggtgataccatgcaa
attccttcgatgtattctgcactgaaacatcaggggaaaccactgtatgagtatgcccgt
caaggtattgaagtggaacgggaagcacggccaattacggtctatgaattacagtttatc
cgctgggaagatgatgaactggaattagaaatacactgttcgaaaggaacttatattcgc
actattattgatgatttaggcgaattattaggttgtggtgctcacgttatttatttacgt
cgtttacaggtagcgaattatccaaatgatcgaatggttacgcttgagcaattatatgaa
ttgcaaaagcaggctgaagatcgggaaatacctttaggcgaattaattgatccgttgtta
ttaccaatggatagtgcagttgctcatttcccagaggttaatttacttccggtagttgca
gcttattttaaacaaggtcaggcggtacgaagtgctaaatctctggctctggttgagagt
atggtgcgcgtaactgagggtgatgaacgcaaattcattggcattgctgttatcaatgac
gatgggcttgttgctcctcgccgtttggttgttgaaaaccgggattag
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