Photorhabdus thracensis: VY86_10980
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Entry
VY86_10980 CDS
T03944
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ptt
Photorhabdus thracensis
Pathway
ptt00071
Fatty acid degradation
ptt00280
Valine, leucine and isoleucine degradation
ptt00310
Lysine degradation
ptt00362
Benzoate degradation
ptt00380
Tryptophan metabolism
ptt00410
beta-Alanine metabolism
ptt00640
Propanoate metabolism
ptt00650
Butanoate metabolism
ptt00907
Pinene, camphor and geraniol degradation
ptt00930
Caprolactam degradation
ptt01100
Metabolic pathways
ptt01110
Biosynthesis of secondary metabolites
ptt01120
Microbial metabolism in diverse environments
ptt01200
Carbon metabolism
ptt01212
Fatty acid metabolism
Module
ptt_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VY86_10980 (fadB)
00650 Butanoate metabolism
VY86_10980 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
VY86_10980 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VY86_10980 (fadB)
00310 Lysine degradation
VY86_10980 (fadB)
00380 Tryptophan metabolism
VY86_10980 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VY86_10980 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VY86_10980 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VY86_10980 (fadB)
00930 Caprolactam degradation
VY86_10980 (fadB)
Enzymes [BR:
ptt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VY86_10980 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VY86_10980 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VY86_10980 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VY86_10980 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AKH63782
UniProt:
A0A0F7LPL2
LinkDB
All DBs
Position
complement(2541130..2543316)
Genome browser
AA seq
728 aa
AA seq
DB search
MLYQSETIQVSWLKDGIAELVFNAPSAINKLDTKTVASLDKAVANLEQQTELKGVLLRSD
KAAFIVGADITEFLSLFDAPVEKLREWLDFANSIFNRIEDLPIPTISAINGYALGGGCEC
VMSTDFRIASPDVRIGLPETKLGIMPGFGGSVRLPRLIGTDNALDIIAAGKDIGAEEALK
NGLIDAVVPSEKLINSAVSMLEQAIAGNLDWKAARQPKLEPLKLNEVERGMSFSVAKGMV
MKVAGPHYPAPITAVKSIEKAATLGRDKALEVEAANFIPLAQTDVARALVGIFLNDQHIK
GLAKKHLKEVTTPEYAAVLGAGIMGGGIAYQSARKGVPVMMKDINQQALELGMNEAAKLL
NKQFERGRLDAIKMARTLSSIQPTLNYAGIGQAQIVIEAVVENPKIKAAVLSETETLVNE
DCVLASNTSTIPISELAKSLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSEKTISTVVAY
ASKIGKTPIVVNDCPGFFVNRVLLPYLLGFGMLLRDGGDFLQIDKIMEKEFGWPMGPAYL
IDVIGLDTAYHSQSVMAQGFPDRMQRDYKDAIDLLYENQRYGQKNGIGFYKYTQDKKGKP
KKEQDEQTDQLLATICQPKNHFSGEEIIARTMIPMINEVVRCLEEGVIASPAEADMALVY
GIGFPPFRGGVFRYLETMGTANYVKMAENYAHLGALYQVPPGLKAKAERNESYYPTAATI
AVSTGTTA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcaaagtgaaacaattcaagtaagctggctgaaagatggcattgctgaactg
gttttcaatgccccctccgctattaataaactggataccaaaactgttgcatctctggat
aaggctgtcgccaatctggaacaacaaactgaattaaaaggcgttttattacgctctgac
aaagctgcatttattgttggtgcagatattactgaatttctctctttattcgatgcacct
gtagaaaaactgcgagagtggcttgatttcgcaaatagcatttttaaccggatagaagat
ttacccatcccaaccatttcagcgataaatggttatgcccttggcggcggttgtgaatgt
gttatgtctacagatttccgtatagcctcccccgatgtgcgcattgggctgccagaaacc
aagcttggcattatgcctggtttcggcggctcagttcgccttccacgccttatcgggact
gataacgcactggatatcatcgccgcaggtaaagacattggtgcagaagaagcattgaaa
aacggcctgattgatgccgttgtccctagtgaaaaactgattaattctgcagtatcaatg
ttggaacaagctattgcagggaaccttgattggaaagcagcacgccagccaaagttagag
cccttgaaactcaatgaagttgaacgtggcatgagttttagcgtggcaaaaggtatggtg
atgaaagttgccggccctcattatccagcgcctattaccgctgttaaatccatagaaaaa
gccgctacacttggccgtgataaagcactggaagtggaagccgccaactttatccctcta
gcgcagacagatgttgcccgtgctttggtcggtatttttcttaatgaccagcacataaaa
gggctggcgaaaaaacatctgaaagaagttacaacacctgagtatgccgcagttctgggc
gcagggattatgggtggtggtatcgcctatcagtctgcccgtaaaggggttcctgtcatg
atgaaagacatcaatcaacaggcccttgaattaggtatgaatgaagcggcaaaactgctg
aacaaacagtttgaacgtggccgtcttgacgccataaaaatggcgcgaaccctttcttct
attcaacctacattaaattatgccggtatcggacaggctcaaatagtgattgaagcagta
gtagagaatcctaagatcaaagcagctgtactctccgaaactgaaactctggttaatgaa
gattgtgttctggcatccaacacttcaacaattccaatttcagaattagctaagtcccta
aaacgcccagaaaatttctgtggtatgcatttctttaacccagtgcatcgtatgccactg
gttgaagtgatccgcggtgaaaaaacctctgaaaaaacaatttcaactgtagttgcttac
gccagcaaaataggtaaaacacctattgttgttaacgactgtccgggattctttgtaaac
cgggtgctgctcccttatctccttggcttcggtatgttgttgcgtgacggtggtgatttc
ctccagatagacaaaattatggagaaggaatttggctggccaatgggtcccgcttatctt
attgatgtcattggtcttgatactgcatatcattctcagtcagtcatggctcaagggttc
ccagatcgtatgcagcgtgattataaagatgctattgatcttctatatgaaaatcaacgc
tacggacagaaaaacggtatcggtttctataagtacacacaggataagaaaggcaaaccg
aagaaagagcaggacgagcaaactgatcaactgttggcaaccatctgccaaccgaagaat
catttctctggtgaagagatcattgcccgtactatgatcccaatgatcaacgaagttgtc
cgctgtttggaagaaggtgtcattgccagcccggcagaagcggatatggctctggtttat
ggtattggtttccctccgttccgcggtggtgttttccgttatctggaaacaatgggaaca
gcaaattacgttaaaatggctgagaattatgctcacctcggtgctctttatcaggtacca
cctggtttgaaagccaaagctgaacgtaatgaaagttactaccctacagcagcaacgatt
gctgtcagcaccggaacaacagcgtga
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