Photorhabdus thracensis: VY86_12620
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Entry
VY86_12620 CDS
T03944
Symbol
cpdB
Name
(GenBank) 2', 3'-cyclic nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
ptt
Photorhabdus thracensis
Pathway
ptt00230
Purine metabolism
ptt00240
Pyrimidine metabolism
ptt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VY86_12620 (cpdB)
00240 Pyrimidine metabolism
VY86_12620 (cpdB)
Enzymes [BR:
ptt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
VY86_12620 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
VY86_12620 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
AKH64042
UniProt:
A0A0F7LQH5
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Position
2883339..2885294
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AA seq
651 aa
AA seq
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MVKHVLKISTLASLVAFNVNAATVDLRVMETSDVHSNLIDFDYFKDKSTEQFGLVRTANL
IKAAKAEASNTILVDNGDLIQGSPLADYMAAKGLKKGESHPAHQLMNTMGYTVGNFGNHE
FNFGLDYLKKVIAGAKFPYINANIMDAKTGKNYFTPYIIVDTPVKDREGKDHTIKIGYIG
FVPPQIAIWDKPNLDGKVVVNDITETAKKFVPQMKKQGADLIIAIPHSGFSKEPYKAMAE
NSVYYLSEVEGIDAIMFGHAHGVFPSEEFADIKGVDVARGTVNGIPAVMPGQWGDHLGVV
DMVINNDGGIWKVAEAKAEARPIYDKVGKKALVGRDSELVKIIEKAHQGTRGFVGKLIGK
ASANMYSYLALIQSDPTVQIVNDAQADYTRRFIQGDPDLADIPVLAAAAPFKVGGRKNAP
ADFVEVEKGDLTFRNAADLYLYPNTLAVVKVTGADVIEWLECSAGMYNQIDPNSTQPQYL
LNWSGFRTYNFDTISGVNYKIDLTQPAKYDVDCQVINQRANRIKEVTYQGKPIDTQAKFL
IATNNYRAYGGKFAGTGEGNIAFASPDENRAILASYIVNVSKERGMVVTRADNNWSIMPI
KTDKKLDIRFETSPSEKAAKFIKELSQYPVKYLQNDDIGFAVYQIDLTGKK
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggttaagcatgtgttgaaaatctccacattagcctcattggtcgcatttaatgtcaat
gctgcaacggttgacttgcgggtaatggaaacatctgatgttcacagtaatctgattgac
tttgattacttcaaagataaatccacagagcaatttggtttggtacgtactgcgaattta
attaaagcggccaaagcagaagcctccaacactatcctggtcgataatggtgacctgatc
caaggtagcccgctggcagattacatggcggcaaagggacttaaaaaaggggaatctcat
ccagcacatcaattaatgaacacaatgggttataccgtgggtaatttcggtaaccacgaa
tttaactttggtttggattatctgaaaaaagtcattgctggtgcgaaattcccttatatc
aatgccaacataatggatgctaaaaccggtaagaactatttcacgccttatattatcgtt
gatacgccagtgaaagatcgggagggtaaagatcacaccattaaaatcggctatatcggt
tttgtaccgccacagattgctatttgggataagcccaatctggatggcaaagttgtcgtt
aacgatattactgaaactgcgaaaaaatttgttcctcaaatgaaaaaacagggcgcagat
ttgattatcgctattcctcactctggtttttccaaagagccttataaggcaatggctgaa
aattcggtttattacctcagtgaggttgaaggcattgatgccattatgtttggtcatgcg
cacggtgtgttcccaagcgaggaatttgcagacattaaaggtgttgatgtcgccagaggt
acggttaatggtattccggccgttatgcccggtcagtggggcgatcatttgggcgttgtt
gatatggttatcaacaatgatggcgggatctggaaggtggcggaagcaaaagcggaagca
cgtccgatttatgacaaagtgggtaaaaaggcactggttgggcgcgatagcgagttagtg
aaaattatcgagaaagcccatcagggaacccggggttttgtcggtaaattgattggtaaa
gcttctgccaatatgtacagctatcttgccctgatccaaagcgacccgacagtacagatc
gtgaatgatgctcaggcagattatacgcggcgtttcattcagggggatccggatttagcg
gatattcctgttttggcagcggcggcacctttcaaagtcggtggtcgtaagaatgccccc
gcagatttcgttgaagttgaaaaaggtgatttgacgttccgtaacgcggcggatctctat
ctatatccaaacacactggctgttgtgaaggtaaccggtgctgatgtgattgaatggctg
gagtgttctgccggcatgtataaccagatcgatccaaattcaacccagcctcagtatttg
ctgaactggagtggttttcgtacttataacttcgacacgattagcggcgtgaattataag
attgatctgactcagcccgctaaatatgacgttgattgtcaggtcatcaatcaaagggcg
aaccgtatcaaggaggtgacttatcagggtaagcctatcgatactcaagctaagtttcta
attgctaccaataattatcgtgcatatggcggtaaatttgccggtacaggcgaaggtaat
atcgcattcgcctcaccggatgagaaccgcgctatcctggcttcttatattgtcaacgtg
tctaaagagagggggatggtcgtgactagggccgataataattggtcgattatgccaatc
aaaactgacaagaaattggatattcgtttcgaaacctctccaagtgagaaagcggcgaaa
ttcattaaagagttatctcagtatccagtgaaatatctgcaaaacgatgatatcggtttt
gcagtgtatcaaattgatttgactggaaaaaaataa
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